Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_12110 |
Symbol | |
ID | 8386548 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | - |
Start bp | 1247892 |
End bp | 1248236 |
Gene Length | 345 bp |
Protein Length | 114 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 644975297 |
Product | predicted membrane protein |
Protein accession | YP_003133087 |
Protein GI | 257055255 |
COG category | [S] Function unknown |
COG ID | [COG3162] Predicted membrane protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.185749 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGAGTACCA CCGAATCCGA GGCACGTCCG CCCGGGGCAC AGTCCTGGGC GGAGGTCCAC GCGAGCGAGG ACTTCCAGCG ACTGCGCAGC CGACTGCGGC GGTTCGTCTT CCCCATGACC GCGCTCTTCC TTGTCTGGTA CCTGACCTAC GTCGTGGTGG CGGACTACGC GCACGACTTC ATGGCCATCA AGGTCGTCGG CAACATCAAC ATCGGTCTGA TCTTCGGCCT GCTGCAGTTC GTGTCGACGT TCGCGATCAC GGCCCTCTAC ATCCGCTACG CCAACCGCAA GCTCGACCCG ATCGCCGACC GGATCAGGAA GAACATGGAA GGGGACGAGT CGTGA
|
Protein sequence | MSTTESEARP PGAQSWAEVH ASEDFQRLRS RLRRFVFPMT ALFLVWYLTY VVVADYAHDF MAIKVVGNIN IGLIFGLLQF VSTFAITALY IRYANRKLDP IADRIRKNME GDES
|
| |