Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_12100 |
Symbol | |
ID | 8386547 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | - |
Start bp | 1246297 |
End bp | 1247895 |
Gene Length | 1599 bp |
Protein Length | 532 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 644975296 |
Product | SSS sodium solute transporter |
Protein accession | YP_003133086 |
Protein GI | 257055254 |
COG category | [R] General function prediction only |
COG ID | [COG4147] Predicted symporter |
TIGRFAM ID | [TIGR00813] transporter, SSS family |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.24513 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACCACCC TCGCCCAGAG CATCGAGGGC AACAATCCCG TCCTCAACAT CACCATCTTC GCGCTGTTCG TCATCGTGAC GCTGGTCGTC GTCTTCCGGG CCTCACGGAA CACCAAGACC GCCTCGGACT ACTACGCGGC GGGCCGTTCC TTCTCCGGAC CGCAGAACGG CACCGCCATC GCGGGCGACT ACCTGTCGGC GGCGTCGTTC CTGGGTATCG CGGGCGCGAT CGCCGTGTAC GGCTACGACG GCTTCCTCTA CTCGATCGGA TTCCTCGTCG CCTGGCTGGT CGCGTTGTTG CTGGTCGCCG AACTGCTGCG GAACACGGGC AAGTTCACCA TGGGCGACGT ACTCGCCTTC CGGATGCGGC AACGCCCGGT CCGGGCCGCG GCGGCGACGT CCACGATGGC CGTGTCGTTC TTCTACCTCC TCGCCCAGAT GGCGGGTGCG GGAGCACTCG TATCGCTGCT GTTGGGCATC GACAGCGACT TCGGACAGGC CGTCGTCATC TGCGTGGTCG GCGTCGTCAT GATCCTGTAC GTGCTCGTCG GTGGGATGAA GGGCACGACC TGGGTGCAGA TCATCAAGGC CGCGCTCCTC ATCGCGGGCA CGTTCGCGAT GACGGTGTGG GTTCTGGGCC ACTACGGACT GAACTTCTCC GAACTCCTCG GGGCCGCCGT CGAACGGTCA CCGGACGGCG AGTCCATGCT GAACCCGGGC GCGAAGTACG GCGTGAGCGA GGCCTCGAAG ATCGACTTCT TGTCGTTGGG CATCGCGCTC GTGCTGGGGA CCGCGGGCCT GCCGCACGTC CTCATGCGCT TCTACACCGT GCCCACCGCC AAGGACGCCC GCAAGTCGGT GGTCTGGGCC ATCGCCCTGA TCGGCCTGTT CTACCTGTTC ACCCTGGTCC TCGGCTACGG CGCCGCGGCC ATCGTCGGGT CCGACACGAT CAGCAACGCG CCCGGCGGCG AGAACTCGGC CGCGCCACTG CTGGCGGAGG CTTTGGGCGG CCCCTTGCTG CTCGGGTTCA TCGCGGCCGT GGCGTTCGCG ACGATCCTGG CGGTGGTGGC GGGTCTGACG ATCACCGCAT CGGCGTCCTT CGCGCACGAC GTGTACGTCA ACGTCATCAA GCGGGGCAAG GCCGACAACA AGAACACCGA GGTCAAGGTC GCACGTATCA CGGCCTGCGT GATCGGGGCC GTGGCGATCA TCGGCGGCAT CCTGGCCAAG GACCAGAACG TGGCGTTCCT CGTGGCGCTG GCGTTCGCGG TCGCCGCGTC GGCGAACCTG CCGACGATCC TGTACTCGCT GTTTTGGAAG CGGTTCAACA CCTCCGGCGC GCTGTGGTCG ATCTACGGCG GTCTGACGGT CACCCTCGTG CTGATCGTGT TCTCGCCCGC CGTGTCGGGT ACCGAGAAGT CGATGATCAC AAGCGTCGAC TTCCACTGGT TCCCGCTGCA GAACCCGGGC CTGGTGTCGA TTCCGGTGTC GTTCTTCCTC GGTTGGTTGG GCACCGTGTT GTCGAAGGAA CACCTGGAGG ACAAGCACAA GGAGATGGAG GTGCGTTCCC TCACCGGCGC GGGTGCCGAG AAGGACTGA
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Protein sequence | MTTLAQSIEG NNPVLNITIF ALFVIVTLVV VFRASRNTKT ASDYYAAGRS FSGPQNGTAI AGDYLSAASF LGIAGAIAVY GYDGFLYSIG FLVAWLVALL LVAELLRNTG KFTMGDVLAF RMRQRPVRAA AATSTMAVSF FYLLAQMAGA GALVSLLLGI DSDFGQAVVI CVVGVVMILY VLVGGMKGTT WVQIIKAALL IAGTFAMTVW VLGHYGLNFS ELLGAAVERS PDGESMLNPG AKYGVSEASK IDFLSLGIAL VLGTAGLPHV LMRFYTVPTA KDARKSVVWA IALIGLFYLF TLVLGYGAAA IVGSDTISNA PGGENSAAPL LAEALGGPLL LGFIAAVAFA TILAVVAGLT ITASASFAHD VYVNVIKRGK ADNKNTEVKV ARITACVIGA VAIIGGILAK DQNVAFLVAL AFAVAASANL PTILYSLFWK RFNTSGALWS IYGGLTVTLV LIVFSPAVSG TEKSMITSVD FHWFPLQNPG LVSIPVSFFL GWLGTVLSKE HLEDKHKEME VRSLTGAGAE KD
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