Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_11520 |
Symbol | |
ID | 8386489 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | - |
Start bp | 1184601 |
End bp | 1185695 |
Gene Length | 1095 bp |
Protein Length | 364 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644975242 |
Product | Histidine kinase |
Protein accession | YP_003133035 |
Protein GI | 257055203 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4585] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.10079 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGATCCCCG CGCTCCAGGC GGCGTTGGAC GACGACCTCG ACGCCGCCGC CAAAGTGGCA CTGATCGCGT CCGCGGCGGC CGCCGTCGTA CAGCGGGTGC GGTTCATCAA CACCGTCCTC CGCGAACGGG AACCTCCGCG CGGACCGACC GCCGAACACA TGACGACGTT CGCGGTCGCG GTCGCCACGT GGGGGTACGG CGTGACCGTA CAGGCCGACC CGCTGTGGTG GTGTTTCCTG CCCGGCATCG TGGCGGGTGG CGTGGTGCTG AACACCGCGC CCGGCCGCCG GATATGGACC ACCCTGGTGC TGGCCGTCGG CACGAGCGTG GCGTGTCCGG TGGCGGCACA GTGGCGGCAG TCCGAACTCG AACCCCGCAT CACGGCGGTC CTGGCGGGTC TTTCGGCGAC GTTCGTGGTG GTCCTCGTGT TCCTGGACGT CGCACAGGTG TGGTTCTGGG ACATGGTGGT GGAACTGGAC CGATCACGGA CGATGGCCGA GGAGCTGGCC GTGGCGCGGG AGCGCCTCCG CTTCGCCGCC GACCTCCACG ACATCCAGGG CCACCATCTC CAAGCGATCA TGCTCAAGGG TGAACTGACC GAACGGCTCA TCGGTCGGGA CGACGACGCG GCGAAGGCTC AGGCCGCCGA ACTCACCGAA CTCGCACGCA CGGCGCTCAC CGACACCCGC CGCGTCGTGC ACGGATACCG CGGCACCACC CTGCACAACG AGATCACCAA CGCTGTCGAG ATCCTCAGCG CGGCGGGCAT CGACACCGAG GTGCACGGGG AATCCCACAC CGTGCCCCCA CCGCTGCAGT CGTTGTTCGG CGCGCTCGTA CGTGAGGGCA CCACCAACAT CCTTCGGCAC AGTCAGGCGA CTCGCTGCCG ACTGACGCTG GAATCCGACG GCACCACGGT CCACGTACGG TTGGTCAACG ACGGCGTCAC CCCTCAGGAC AGCCGGCCCG GAAGCGGCAT CGAAAGCCTG CGCGAACGAT TCACCGCGCT CGGTGGGGAC GTGTACGCCC GTGTGGTCGG TGCCGGTGAC GACACCACGT TCGAACTGGG CGGCCATGCC CCCACACGGA GGTGA
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Protein sequence | MIPALQAALD DDLDAAAKVA LIASAAAAVV QRVRFINTVL REREPPRGPT AEHMTTFAVA VATWGYGVTV QADPLWWCFL PGIVAGGVVL NTAPGRRIWT TLVLAVGTSV ACPVAAQWRQ SELEPRITAV LAGLSATFVV VLVFLDVAQV WFWDMVVELD RSRTMAEELA VARERLRFAA DLHDIQGHHL QAIMLKGELT ERLIGRDDDA AKAQAAELTE LARTALTDTR RVVHGYRGTT LHNEITNAVE ILSAAGIDTE VHGESHTVPP PLQSLFGALV REGTTNILRH SQATRCRLTL ESDGTTVHVR LVNDGVTPQD SRPGSGIESL RERFTALGGD VYARVVGAGD DTTFELGGHA PTRR
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