Gene Svir_11340 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_11340 
Symbol 
ID8386471 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp1172463 
End bp1173407 
Gene Length945 bp 
Protein Length314 aa 
Translation table11 
GC content67% 
IMG OID644975224 
Productglycosyltransferase 
Protein accessionYP_003133017 
Protein GI257055185 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.852115 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCTGC TCGTGTGGCA CGTCCACGGT TCTTGGACGA CCGCTTTCGT CCAAGGAGAG 
CACACTTATC TTCTGCCCAC TGTGGATGAT CGTGGACCGT GGGGCCGAGG TAGGTGTGGC
CGCCCGTGGC CCGACTCGGC CGTGGAGGTC CCACCGGACG AGCTACGCGA GGCGGACATC
GACGCCGTGG TGCTCCAACG GCCCGAGGAG ATCGACCTGA CGGTGGAATG GCTCGGCAGC
CGGCCCGGCA CGGACCTGCC CGCCGTCTAC GTCGAGCACA ACACGCCCCG GGGTCATGCG
GCGAACTCCC GCCATCCCCT GGCAGACCAG GACGACATCG CGATCGTGCA CGTCACTCAC
TACAACGAGT TGATGTGGGA CAACGGAATC GCTCCCACCG TGGTCATCGA ACACGGCGTC
CTCGACCCCG GACACCGCTA CACCGGCGAA TTGGCCCGCG CGGCGGTGCT CATCAACGAA
CCCGTGCGAC GGGGCCGGAT CGTGGGGACC GACCTACTGC CCACGTTCGC TCGGGCCGCG
CCGATCGATC TCTACGGGAT CGATGTCGAC GGCGTCACCA TCGACGGCGT GACACCGATC
GGCGATCTGT CCCAGGACGC GCTACACACG GAGATGGCTC GCAGGCGCGT GTACGTACAC
ACGGCCAGAT GGACTTCACT GGGGCTGTCC CTGGTGGAGG CCATGCACCT GGGGATGCCC
GTCGTGGCGG TGGCCTCCGC GGAGGCCGCC ACCGCGGTTC CCCGGGAGGC CGGTGTGGTG
TCCACCGACG TCGTCGAGCT CGCCTCGGCA GTGCGTACCT TCTGCTCCGA CCCCGAGCTG
GCCACCCGTG TGGGCAAATC GGCCCGCGAG TACGCGCTGA CGCGGTTCGG GCTCGAAACG
TTCCTACACC GCTGGGACAC CCTGCTCGCT GCGCTTTTGC CCTGA
 
Protein sequence
MKLLVWHVHG SWTTAFVQGE HTYLLPTVDD RGPWGRGRCG RPWPDSAVEV PPDELREADI 
DAVVLQRPEE IDLTVEWLGS RPGTDLPAVY VEHNTPRGHA ANSRHPLADQ DDIAIVHVTH
YNELMWDNGI APTVVIEHGV LDPGHRYTGE LARAAVLINE PVRRGRIVGT DLLPTFARAA
PIDLYGIDVD GVTIDGVTPI GDLSQDALHT EMARRRVYVH TARWTSLGLS LVEAMHLGMP
VVAVASAEAA TAVPREAGVV STDVVELASA VRTFCSDPEL ATRVGKSARE YALTRFGLET
FLHRWDTLLA ALLP