Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_11230 |
Symbol | |
ID | 8386460 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | - |
Start bp | 1158523 |
End bp | 1159977 |
Gene Length | 1455 bp |
Protein Length | 484 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 644975213 |
Product | cytidyltransferase-related enzyme |
Protein accession | YP_003133006 |
Protein GI | 257055174 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2870] ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase |
TIGRFAM ID | [TIGR00125] cytidyltransferase-related domain [TIGR02198] rfaE bifunctional protein, domain I [TIGR02199] rfaE bifunctional protein, domain II |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.448325 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.110426 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGGCCCC TCGTGGTGCT CGGCGATGCC CTGCTCGACG TGGACGTCGA GGGCAGTGCC ACGCGCCTGT GCCCGGAGGC GCCCGTGCCC GTGGTGGACG TCGAGGGGGA ATGGGTGCGC CCCGGCGGGG CGGGACTCGC GGCGATGTTG CTGGCCACCC GAACCACCCC GGACGTGGTG CTCGTGACGG CGCTGGGCGC CGACACCACC GGACGTCGCC TCGCGTCGCT GCTGGCACGC GACGTGGAGG TGTTGCGGCT GCCGTTGGAC GGCGAGACGC CGCGCAAGAC CCGGGTGCGG GCCTCGGGAC AGTCCCTCAC ACGGTTGGAC ACCGGGCGGG GCCGCGCGGC CGAGGCCCCA CTACCCGCAC GGGTACGGCA CGCGGTCGAC GGCGCCGGGG CGGTGCTGGT GTCCGACTAC GGCCGTGGCG TGACCGCGCA CCCCGAGCTG CGACGGCTGT TGACGGAGCT GACCACCCAC GTCCCGGTGG TCTGGGACCC GCATCCACTC GGCCCACCCC CGGTTCCGGG AGCGACCTTG GTGACGCCGA ACGAACGCGA GGCACTGGCC GTGGCCGAGG GGTGCGTGGA CGTCGCCGAC GCCGCCGAGG CCGTACGACG CGGCTGGGGG TGCCGTGCCA CGGCGGTGAC GCTGGGGGCG GAAGGCGCCG TGCTGGCCAC TCCCGACTCG GCCGAACCCA TCCCGGTGCC GGTGCCGGAC GGCGCGTTCC TCGGCGCCCA GCAGCTCGAC ACCTGCGGTG CGGGCGACCG GTTCGCCAGC GCCGCCGTGG CCGCGTTGGC CGAGGGCGCC GATGTCACCG ACGCCGTCGT CACGGCGGTG GACACGGCCT CCCGATTCGT CGCCGCGGGC GGTGCCTCGG CGCTGTCCGT GCACTACGCC GACCGCCGGG ACGGCCCCGA GGGGACGCAC TTTCCCGGAA GGTCGGCGTT CGAGTTCGGC GAGCACGTAC GCAGACGCGG GGACCGCCTC GTCGCCACGG GTGGCTGTTT CGACCTGTTG CACGCCGGGC ACGTGAGTCT GCTGAAACAA GCGAGGGCAC TCGGTGACGC GCTCGTGGTG TGTGTCAACT CCGACGAGTC CGTGCGTCGA CTGAAAGGCC CCGGACGTCC GGTGGTCCCC GCCGCCGACC GTGCCCGACT GCTGGCCGAA CTGTCCTGTG TGGATTCGGT GGTGGTGTTC GAGGAGTCGA CACCGTCGGC GGTGTTGGAA CGGCTGCGAC CCGACGTGTG GGTCAAAGGG GGCGACTACG CGGACGACGA GCTGCCCGAG GCCGAGGTGG TGCGCCGTCA CGGCGGTGAG GTGGTGCTGG TACCGACCCT CGACGGCTAC TCCACCACCC GGTTGTTGCA GGAGGCGCTT CGCCGACCGA GGGCGACGGT GCACGACGGA CGAGGGTGGG CACCGGGAAC GATCGGGAGC AAGGAGGCAC GATGA
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Protein sequence | MRPLVVLGDA LLDVDVEGSA TRLCPEAPVP VVDVEGEWVR PGGAGLAAML LATRTTPDVV LVTALGADTT GRRLASLLAR DVEVLRLPLD GETPRKTRVR ASGQSLTRLD TGRGRAAEAP LPARVRHAVD GAGAVLVSDY GRGVTAHPEL RRLLTELTTH VPVVWDPHPL GPPPVPGATL VTPNEREALA VAEGCVDVAD AAEAVRRGWG CRATAVTLGA EGAVLATPDS AEPIPVPVPD GAFLGAQQLD TCGAGDRFAS AAVAALAEGA DVTDAVVTAV DTASRFVAAG GASALSVHYA DRRDGPEGTH FPGRSAFEFG EHVRRRGDRL VATGGCFDLL HAGHVSLLKQ ARALGDALVV CVNSDESVRR LKGPGRPVVP AADRARLLAE LSCVDSVVVF EESTPSAVLE RLRPDVWVKG GDYADDELPE AEVVRRHGGE VVLVPTLDGY STTRLLQEAL RRPRATVHDG RGWAPGTIGS KEAR
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