Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_11050 |
Symbol | |
ID | 8386442 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | + |
Start bp | 1136321 |
End bp | 1137397 |
Gene Length | 1077 bp |
Protein Length | 358 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 644975195 |
Product | monosaccharide ABC transporter membrane protein |
Protein accession | YP_003132988 |
Protein GI | 257055156 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 40 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.543201 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACCGAGA CGCTCGACCG ACCGCCGACG CGGGCCCGGA GCGCGGGCGC GCGACGTCGA CAAGCCGTCG ACGTGCGGCT CCTCGGACTG ACGGGCGTGT TGGTGCTGCT ATGCCTCATC GGCTTCATCA CCAACCCCGA CACGTTCCTC ACTCAGGACA ACATCTCCAT CATGCTTCGG CTCGCCGCGG CGATCGGCGT GGTGAGTGTC GGCATGACCT TCGTCATCAT CGCCGGGGGC ATCGACCTGT CCGTCGGGTC GATCGTGGCG TTGGCGAGCG TCTGGATGAC CACGGTGGCC ACGCAGTCGT ACGGCCCGGT CGTGATGGTG CTGTGCGCGC TCGCCGTGGG ACTGGGCTGC GGCCTGGTCA ACGGGCTGCT GATCTCCTAC GGCAAGGTCG TCCCGTTCAT CATGACCCTG GCGATGATGG CCTCGGCTAA GGGACTGGCC GAGCGCATCA GTGACCGGCG CACCCAGGTG GTGACCGAAA CGGGGTTCAC CGAATTCTTC CGCGGCAGCT TCCTCGGCAT CCCGGTGCTG GTGTGGTTGC TGGCCCTGGT GTTCGCCGTC GGTTGGCTCG TGCTCAACCG GACCACGTTC GGCCGGAGGA CGTACGCCAT CGGCGGTAAC GCGGAGGCCG CGCGACTGTC GGGGATCAAC GTCAAACGAC ACACCGCCTT GGTGTACGGC ATCAGCGGAC TGTGTTGCGG CATCGCAGCG ATCATGGTGG TGGCTCGGAC GACGTCCGGG GCCTCGACCA ACGGACTGTT CTACGAACTC GACGCCATCG CGGCCGTCGT CATCGGCGGC ACCCTGCTCT CGGGCGGGCG CGGCAGTCTC CTCGGGACAC TCGTCGGTGT TCTGATCTTC ACGGTCCTCA ACAGCATCTT CACGCAGAAC AACCTCGACA CCGACATCCA GAACATCGCC AAGGGCGCGA TCATCGTCGT CGCCGTGCTG CTGCAGAACA CCGCCCGGCA ACGCAAGGAC AAGGGCAAGG GCACCTCCCC GCCCCCTGCG GCCCCGCAGG AGCCTTCCCC CGACCCGGCA ATCGAAACCA GTGGGAGTAA GCCATGA
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Protein sequence | MTETLDRPPT RARSAGARRR QAVDVRLLGL TGVLVLLCLI GFITNPDTFL TQDNISIMLR LAAAIGVVSV GMTFVIIAGG IDLSVGSIVA LASVWMTTVA TQSYGPVVMV LCALAVGLGC GLVNGLLISY GKVVPFIMTL AMMASAKGLA ERISDRRTQV VTETGFTEFF RGSFLGIPVL VWLLALVFAV GWLVLNRTTF GRRTYAIGGN AEAARLSGIN VKRHTALVYG ISGLCCGIAA IMVVARTTSG ASTNGLFYEL DAIAAVVIGG TLLSGGRGSL LGTLVGVLIF TVLNSIFTQN NLDTDIQNIA KGAIIVVAVL LQNTARQRKD KGKGTSPPPA APQEPSPDPA IETSGSKP
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