| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_11000 |
|---|
| Symbol | |
|---|
| ID | 8386437 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharomonospora viridis DSM 43017 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013159 |
|---|
| Strand | + |
|---|
| Start bp | 1130432 |
|---|
| End bp | 1130848 |
|---|
| Gene Length | 417 bp |
|---|
| Protein Length | 138 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 644975190 |
|---|
| Product | conserved hypothetical protein TIGR00026 |
|---|
| Protein accession | YP_003132983 |
|---|
| Protein GI | 257055151 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR00026] deazaflavin-dependent nitroreductase family protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGAGC CGATGGTGTT CGGTGCCGAA CACGTACGGC AGTACGAAAA AAGTGACGGT
GAGCTCGGTT ACCTCCGACA CGGCGCGCCG ATCCTCATCC TGACCACCAC CGGTCGGAAG
ACGGGACGAC CCCGTAAGGT GGCCTTGATC TTCCAAGAAC ACGAGGGGTG TTACGTCGTG
GTCGCGTCCA ACGGGGGCGC CGCCGACCAC CCCGACTGGT ACAAGAACCT CCGCGTCGAC
CCGGAGGTCC GGGTGCAGGT GAAGGCGGAC CGGTTCGCCG CGCGTGCCAG AACGGCCACG
GGTGAGGAGC GGGAGAGGTT GTGGCGGATC ATGGCGGCCG TATTCCCCAC GTACGACGAA
TACCGGCGGA GGACCGAACG GGAGATCCCG GTCGTGGTCC TGGAGCCGAA GCGCTGA
|
|---|
| Protein sequence | MTEPMVFGAE HVRQYEKSDG ELGYLRHGAP ILILTTTGRK TGRPRKVALI FQEHEGCYVV
VASNGGAADH PDWYKNLRVD PEVRVQVKAD RFAARARTAT GEERERLWRI MAAVFPTYDE
YRRRTEREIP VVVLEPKR
|
|---|
| |