| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_10620 |
|---|
| Symbol | |
|---|
| ID | 8386399 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharomonospora viridis DSM 43017 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013159 |
|---|
| Strand | - |
|---|
| Start bp | 1092344 |
|---|
| End bp | 1094272 |
|---|
| Gene Length | 1929 bp |
|---|
| Protein Length | 642 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 644975152 |
|---|
| Product | asparagine synthase (glutamine-hydrolysing) |
|---|
| Protein accession | YP_003132945 |
|---|
| Protein GI | 257055113 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0367] Asparagine synthase (glutamine-hydrolyzing) |
|---|
| TIGRFAM ID | [TIGR01536] asparagine synthase (glutamine-hydrolyzing) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.295992 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTGCGGCC TGCTTGGACT GGTCTGTGGC AGTGAGGATG ACGCGGCGAG CCTCAAGGAC
GCCGTCGGCC GCGCGCTGCG CTGTCAGCGA CATCGCGGTC CGGATGAGAC CGACATTTGG
GCGAATGGCC AGGTCATCTA TGGCTTCAAT CGGCTCGCCA TCATCGACCT CGAGCACTCA
CGCCAACCAC TGACCTGGGG GCCCGAGGAC AATCCCACGC GCTACACCAT CATCTTCAAC
GGTGAGATCT ACAACTACCT CGAGCTACGC GAGGAACTAG AGAAAGAACA CGGTGCGAAA
TTCGCCACAG CAGGTGACAC CGAGGCGATC GTCGCGGCCT ACCACCACCT CGGCCCGGCG
GCCGTCGGTC GGCTGCGGGG CATGTTCGCG TTCTTGATCT GGGACTCCGA ACGCAGCGTG
CTCTTCGGCG CGCGGGACCC CTTCGGCATC AAGCCGCTGT TCTACTCGAC GGGTCCGAAG
GGCGTCGCGT TCGCCAGCGA GAAGAAGAGC CTGCTGGAGC TGTCGTCCAC GCTGGGTGTG
GAGCCCGAGC TGGACCGCAC GGCGTTGCAG CACTACCTGA CGCTGCAGTA CGTGCCGGAA
CCGGAGTCAC TGCACCGAAG CATCCGGCGC ATCGAGTCCG GCACGTCCTT CACCGTGACC
CCGGGTGGGG AGCTGAAGAC GGAGCGCTAC TTCTCCCCCG AGTTCCGCTC ACAACCGGTG
TCAGGCGCCG CTCAGGTGGC GGCACTGCAC GAGAGCATCG CCGAGGTCTT GCGCGACTCG
GTGGCCAAGC ACATGCGTGC CGACGTCACG GTGGGCGCGT TCCTGTCGGG TGGTATCGAC
TCCACCGCCA TCGCCGCCCT GGCGAAGGAG CACAACCCGG ACCTGATCAC CTTCACCACC
GGGTTCGAAC GCAAGGGGTA CTCCGAGGTG GACGTCGCCG CCGAGTCCGC CGCCGCCCTC
GGGGTCAAAC ACGTGGTGCG CACCGTCTCC GCCGAGGAGA TGATGGAGAC ACTGCCCCTG
ATCGTGTGGT ACCTCGACGA CCCGGTGGCC GATCCGGCGC TCGTGCCGCT GTGGTTCATC
GCCCGCGAAG CACGCAAGCA CGTGAAGGTG GTGCTGTCGG GTGAGGGCTC CGACGAGCTG
TTCGGCGGGT ACACGATCTA TCGGGAGCCG CTGTCACTGG CGCCGTTCGA GAAGGTCCCC
GGCGGCGTGC GCAAGCTCAT CGGCAAGGCT TCCACGCTGA TCCCCGAGGG CACGCGCGGC
AAGGACCTGT TGCGCCGTGG TGCGTTGACC CTGGAAGAGC GGTACTACGG CAATGCCCGC
CTGTTCCGGG ACGACCAACT GAAGCCGATT CTGCGGACGT TCCGCGAAGG GATCGGCCAC
CGCGACGTCA CCGCGCCGTG GTATCGGCTG TCCCGCGGAT GGGACCCGGT GGCCCGCATG
CAGCACGTCG ACCTGTTCAC GTGGCTGCGC GGGGACATCC TCGTCAAGGC CGACAAGGTG
ACGATGGCCA ACTCGCTGGA GCTGCGAGTG CCGTTCTTGG ACGCCGAGGT GTTCCGCGTC
GCGTCGACCA TCCCGCTGGA CCAGAAGATC ACCAAGGAGA CCACGAAGTT CGCGTTGCGT
CGGGCGTTGG ACGGCATCGT GCCGGCCCAC GTGCTCAACC GTCGCAAGCT GGGCTTCCCG
GTGCCGATTC GGCACTGGCT GCGCTCCGAG ATGTACGACT GGGCCCGCGG CATCATCAGC
GAGTCGAAGA CCGACGAGCT GCTCGACAAG CGCGCGATCC TCGCGATGTT GGAGGAGCAC
CGCAACGGCA CGCTCGATCA CAGCCGGCGG CTGTGGGCGT TGTTGGTCTT CATGCTCTGG
CACGGCATCT TCGTCGAGGA CCGGATCAAG CCGGAGGTGC CCGAGCCGCA GTATCCGGTG
CAGCTCTAA
|
|---|
| Protein sequence | MCGLLGLVCG SEDDAASLKD AVGRALRCQR HRGPDETDIW ANGQVIYGFN RLAIIDLEHS
RQPLTWGPED NPTRYTIIFN GEIYNYLELR EELEKEHGAK FATAGDTEAI VAAYHHLGPA
AVGRLRGMFA FLIWDSERSV LFGARDPFGI KPLFYSTGPK GVAFASEKKS LLELSSTLGV
EPELDRTALQ HYLTLQYVPE PESLHRSIRR IESGTSFTVT PGGELKTERY FSPEFRSQPV
SGAAQVAALH ESIAEVLRDS VAKHMRADVT VGAFLSGGID STAIAALAKE HNPDLITFTT
GFERKGYSEV DVAAESAAAL GVKHVVRTVS AEEMMETLPL IVWYLDDPVA DPALVPLWFI
AREARKHVKV VLSGEGSDEL FGGYTIYREP LSLAPFEKVP GGVRKLIGKA STLIPEGTRG
KDLLRRGALT LEERYYGNAR LFRDDQLKPI LRTFREGIGH RDVTAPWYRL SRGWDPVARM
QHVDLFTWLR GDILVKADKV TMANSLELRV PFLDAEVFRV ASTIPLDQKI TKETTKFALR
RALDGIVPAH VLNRRKLGFP VPIRHWLRSE MYDWARGIIS ESKTDELLDK RAILAMLEEH
RNGTLDHSRR LWALLVFMLW HGIFVEDRIK PEVPEPQYPV QL
|
|---|
| |