| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_10310 |
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| Symbol | aceE |
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| ID | 8386368 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | - |
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| Start bp | 1058778 |
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| End bp | 1061594 |
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| Gene Length | 2817 bp |
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| Protein Length | 938 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644975121 |
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| Product | pyruvate dehydrogenase subunit E1 |
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| Protein accession | YP_003132915 |
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| Protein GI | 257055083 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2609] Pyruvate dehydrogenase complex, dehydrogenase (E1) component |
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| TIGRFAM ID | [TIGR00759] pyruvate dehydrogenase E1 component, homodimeric type |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.0229969 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGCCCCCC AGAACGACGA GGCCGGGCGC GGCATCACTG AAGGCGCCTC CGGCCAAGGA
GCACCGGCAC GTGTTCGCGT CATCCGAGAC GGACTGGCGG CGCACTTGCC CGACATCGAC
CCGGAGGAGA CGGCCGAATG GCTCGACTCC TTCGACGCCG CACTGGCAAG GGGCGGTCAA
CAGCGCGCCA GGTACCTGTT GCTCAGGATG CTGGAGCGCG CCCGCGAGCG CAACGTGGGC
GTGCCGCCGC TTTCCACCAC GGACTACGTC AACACGATCC CCACGGAGAA CGAACCGTGG
TTCCCCGGTG ACGAGGAGAT CGAACGCCGC TACCGTGCGT TCATCCGCTG GAATGCCGCG
ATCATGGTGC ACCGGGCGCA GCGGCCGGGA GTGGGCGTGG GCGGTCACAT CTCCACCTAT
GCCTCGTCCG CAGCGCTCTA CGAAGTGGGC TTCAACCACT TCTTCCGAGG CAAGAACCAT
TCCGGCGGAG GCGACCAGAT CTTCATCCAG GGACACGCCT CCCCCGGTAT CTACGCCAGG
GCCTTCCTCG AAGGCAGGCT GACCGCCGAG CAGCTCGACG GCTTCCGACA GGAGATCTCG
CACGCAGGCG AAGGCGGAGG CCTGCCGTCC TACCCCCACC CGAGGCTGAT GCCGGACTTC
TGGGAGTACC CCACGGTGTC GATGGGCCTC GGCCCGATGA ACGCGATCTA CCAGGCGCGT
TTCAACCGCT ACCTGCACGC CCGAGGCATC AAGGACACCA GCGACCAGCA CGTCTGGGCG
TTCCTCGGGG ACGGCGAGAT GGACGAGCCC GAGTCGCGCG GCCTCATCCA CGTGGCCGCG
GCCGAGGGGC TGGACAACCT CACGTTCGTC ATCAACTGCA ACCTGCAGCG ACTCGACGGA
CCGGTCCGCG GAAACGGCAA GATCATCCAG GAACTGGAGG CCTTCTTCCG TGGCGCCGGT
TGGAACGTCA TCAAGGTCAT CTGGGGACGC GAGTGGGACG CGCTGCTGCA CGCCGACCGC
GACGGCGCCC TGGTGAACCT CATGAACCAG ACACCGGACG GCGACTACCA GACGTACAAG
GCCAATGACG GCGCGTACGT CAGGGAGCAC TTCTTCGGCC GCGACCCGCG CACCAAGGAA
CTGGTGGCGC ACCTCACCGA CGAGCAGATC TGGAACCTCA AGCGCGGCGG CCACGACTAC
CGCAAGGTGT ACGCGGCGTA CAAGGCGGCG ATGGAACACC ATGGCCAGCC GACGGTGATC
CTGGCCCACA CCATCAAGGG CTACGGCCTC GGCCCGGCCT TCGAAGGCCG CAACGCCACC
CACCAGATGA AGAAGCTGAC GCTCGACGAC CTGAAGCTGT TCCGGGACGC CCAGCGCATC
CCGATCAGCG ACGCCGAGCT GGAACGTGAC CCGACGCTGC CGCCGTACTA CCACCCCGGT
GAGGACTCAC CGGAGATCCA GTACATGAAG GGCCGTCGTC AGGCCCTGGG CGGCTACCTG
CCCGAGCGTC GGTCCACGGC CAAGCCGCTG GTGCTGCCGG GCGACAAGGT GTACGAGGCC
ATCCGCAAGG GTTCGGGTAA GCAGGACGTC GCCACCACGA TGGCGGTCGT CCGGCTGATC
AGGGAGCTGG CGAAGGACCC CGAGATCGGG CACCGCCTGG TGCCGATCAT CCCGGACGAG
GCCCGTACGT TCGGGCTCGA CTCGATGTTC CCGACGGCCA AGATCTACAA CCCGCACGGC
CAGAACTACA CCTCGGTCGA CGCGCAGCTG ATGCTCGCCT ACAAGGAGTC CGAGCAGGGT
CAGCTGTTGC ACGAGGGAAT CAACGAGGCC GGTTCCACGG CGTCGTTCAC GGCGGCGGGC
ACGTCGTACG CCACGCACGG CGAGCCGATG ATCCCGATCT ACATCTTCTA CTCGATGTTC
GGGTTCCAGC GCACCGGCGA CAGCCTGTAC GCGGCGGCCG ACCAGATGGC CCGCGGATTC
GTGCTGGGCG CCACGGCGGG CCGGACCACG TTGACCGGTG AGGGCCTCCA GCACGCCGAC
GGGCACTCCC AGCTGCTGGC GACGACCAAC CCGGGAGTGG TGGCGTACGA CCCCGCGTGG
GCGTTCGAAA TCGCCCACAT CGTGAAGGAC GGTCTGCGCC GCATGTACGG CGAGACGGGC
CGCGACGGCA ACGGGGAAGA CGTCTTCTAC TACATCACCG TCTACAACGA GCCGTACCAG
CAGCCGCCGG AGCCGGAGAA CCTCGACGTG GAGGGCCTGC TGAAGGGCCT CTACCTCTAC
CAGACGGCGC CGAACGACAT CGGGCCGAAG GCGCAGATCC TGGTGTCCGG TGTCCTGATG
CCCGAAGCCC TGCGAGCCCA GCGGATGCTG GCCGAGGAAT GGGGTGTCAG CGCGGACGTC
TGGTCGGCCA CGTCGTGGAG CGAACTGCGC CGCGAGGCCG TGGAGGTCGA CCGGGACAAC
TTCCTCCACC CGGCGGACGA GCCGCGCGTG CCGTACGTGA CGCAGAAGCT GTCGAACGCC
GAAGGCCCGG TCGTGGCCGT GTCGGACTGG ATGCGCGCCG TACCGGACCT GATCCGGCCG
TGGGTACCCA CCGACATGCT CACGCTGGGC ACCGACGGGT TCGGCTTCTC CGACACCCGG
CCGGCCGCTC GCCGGTACTT CCTGGTCGAC GCCGAGTCGA TCACGGTCGG GGTGCTCACG
ATGCTGGCCC GTCGCGGCGA GATCACCCAG GACACGGTCG TGGAGGCCGC GCGGAAGTAC
CGCATCCACG ACGTCTCCGC CGCTGGTCCG CAGACCTCGG ATCCCGGCGT GGCCTGA
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| Protein sequence | MAPQNDEAGR GITEGASGQG APARVRVIRD GLAAHLPDID PEETAEWLDS FDAALARGGQ
QRARYLLLRM LERARERNVG VPPLSTTDYV NTIPTENEPW FPGDEEIERR YRAFIRWNAA
IMVHRAQRPG VGVGGHISTY ASSAALYEVG FNHFFRGKNH SGGGDQIFIQ GHASPGIYAR
AFLEGRLTAE QLDGFRQEIS HAGEGGGLPS YPHPRLMPDF WEYPTVSMGL GPMNAIYQAR
FNRYLHARGI KDTSDQHVWA FLGDGEMDEP ESRGLIHVAA AEGLDNLTFV INCNLQRLDG
PVRGNGKIIQ ELEAFFRGAG WNVIKVIWGR EWDALLHADR DGALVNLMNQ TPDGDYQTYK
ANDGAYVREH FFGRDPRTKE LVAHLTDEQI WNLKRGGHDY RKVYAAYKAA MEHHGQPTVI
LAHTIKGYGL GPAFEGRNAT HQMKKLTLDD LKLFRDAQRI PISDAELERD PTLPPYYHPG
EDSPEIQYMK GRRQALGGYL PERRSTAKPL VLPGDKVYEA IRKGSGKQDV ATTMAVVRLI
RELAKDPEIG HRLVPIIPDE ARTFGLDSMF PTAKIYNPHG QNYTSVDAQL MLAYKESEQG
QLLHEGINEA GSTASFTAAG TSYATHGEPM IPIYIFYSMF GFQRTGDSLY AAADQMARGF
VLGATAGRTT LTGEGLQHAD GHSQLLATTN PGVVAYDPAW AFEIAHIVKD GLRRMYGETG
RDGNGEDVFY YITVYNEPYQ QPPEPENLDV EGLLKGLYLY QTAPNDIGPK AQILVSGVLM
PEALRAQRML AEEWGVSADV WSATSWSELR REAVEVDRDN FLHPADEPRV PYVTQKLSNA
EGPVVAVSDW MRAVPDLIRP WVPTDMLTLG TDGFGFSDTR PAARRYFLVD AESITVGVLT
MLARRGEITQ DTVVEAARKY RIHDVSAAGP QTSDPGVA
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