| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_09960 |
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| Symbol | |
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| ID | 8386333 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | + |
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| Start bp | 1021700 |
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| End bp | 1022812 |
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| Gene Length | 1113 bp |
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| Protein Length | 370 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644975086 |
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| Product | ribosomal RNA large subunit methyltransferase N |
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| Protein accession | YP_003132880 |
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| Protein GI | 257055048 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0820] Predicted Fe-S-cluster redox enzyme |
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| TIGRFAM ID | [TIGR00048] radical SAM enzyme, Cfr family |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.434962 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCCTCTGG TTTTCGACGC TCCCCGCCGT GGACTGCCCC GGCGGCATCT CGCCGACCTC
ACCGTGACCG AACGGGCGGA GGCCGTGGTC GCGCTGGGGG AGAAGCCTTT CCGCGCCAAA
CAGCTTTCAC ACCACTACTT CTCGCGACTG ACGGTGGACC CGGAGGCGAT GACCGACATC
CCGGCGGCGT CGCGCCGACG GCTGGTGGAC GAGCTGATGC CGCCGCTGTT GACGCAAGTA
CGCGCCGTGG ATTGCGACGG GGGTAGCACG CGTAAGACGC TGTGGCGCGC TCACGACGGC
ACCCTGGTGG AAAGCGTCCT CATGCGCTAT CCGGACCGTG CGACGTTGTG CATCTCGAGT
CAGGCCGGTT GTGGCATGGC GTGTCCGTTC TGCGCCACGG GCCAGGGCGG TCTGACCCGT
AACCTCTCGA CCGCCGAGAT CGTCGACCAG GTGCGGGCCG CTGCGGCGGT GATGCGGGAC
GGGCTGATGC CGGGGCCGGA CGGCGCTCCG AAGCCGGGCA GGCTGTCGAA CATCGTGTTC
ATGGGGATGG GGGAACCGCT GGCCAATTAC AAGCGGGTGT TGGCCGCGGT GCGGCGGATC
ACGGACCCCC CTCCCGCCGG TCTGGGGATC TCACAGCGTT CGGTGACGGT GTCCACCGTG
GGGTTGGCTC CGGCCATCAG GAAGTTGGCC GATGAGGGTC TGCAGGTGCG GTTGGCGGTG
TCACTGCACA CGCCGGACGA CGAGTTGCGC GACGAGCTCG TTCCGGTGAA CAACCGCTGG
TCCGTCGACG AGGTTCTGCG GGCGGCCCGC TACTACGCGG ATCGGACCGG GCGGCGGGTG
TCGATCGAGT ACGCGTTGAT CCGTGACATC AACGACCAGC CGTGGCGTGC GGACCTGCTG
GCGAAGCGGC TGCGGGAGCA CCTCGGTCAG CTCGTGCACG TCAACGTCAT TCCGCTGAAC
CCCACGCCGG GGAGTAAGTG GGACGCGAGC CCGAAGCCCG TGGAGCGGGA GTTCGTGCGT
AGGGTCAACG CCGGTGGGGT GGCCTGCACG GTGCGGGACA CCCGTGGCCA GGAGATCGCG
GCGGCCTGTG GCCAGCTCGC GGCCGAGGGA TGA
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| Protein sequence | MPLVFDAPRR GLPRRHLADL TVTERAEAVV ALGEKPFRAK QLSHHYFSRL TVDPEAMTDI
PAASRRRLVD ELMPPLLTQV RAVDCDGGST RKTLWRAHDG TLVESVLMRY PDRATLCISS
QAGCGMACPF CATGQGGLTR NLSTAEIVDQ VRAAAAVMRD GLMPGPDGAP KPGRLSNIVF
MGMGEPLANY KRVLAAVRRI TDPPPAGLGI SQRSVTVSTV GLAPAIRKLA DEGLQVRLAV
SLHTPDDELR DELVPVNNRW SVDEVLRAAR YYADRTGRRV SIEYALIRDI NDQPWRADLL
AKRLREHLGQ LVHVNVIPLN PTPGSKWDAS PKPVEREFVR RVNAGGVACT VRDTRGQEIA
AACGQLAAEG
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