| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_09350 |
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| Symbol | |
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| ID | 8386272 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | - |
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| Start bp | 961510 |
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| End bp | 962520 |
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| Gene Length | 1011 bp |
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| Protein Length | 336 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644975025 |
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| Product | virulence factor Mce family protein |
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| Protein accession | YP_003132819 |
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| Protein GI | 257054987 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG1463] ABC-type transport system involved in resistance to organic solvents, periplasmic component |
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| TIGRFAM ID | [TIGR00996] virulence factor Mce family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.960251 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGAGGAC TCGTCGGGCC GCTGCTCAAA GGGCTGGCGT TCGTGCTCGT CACCACCGTG
GCGACGGTGT TGCTGGCCGT GTCCATCTCG AACGTCGGAG TGGGGCAACG CGTCGGCTAC
AGCGCCAGGT TCACCGACGT CACCTCGCTC AACGTAGGTG ACGACGTGCG CATCGCGGGC
GTGCGTGTGG GGCAGGTGGA CGGACTGGAG ATCATCGACC GGCACATCGC CCGGGTGCGT
TTCTCGGTGG ACGCGACCCG ACCGCTCCCC GCCGACGTCA CCGCCACCAT CCGCTACCGC
AACATGCTCG GCCAGCGCTA CATCGCCTTG GAACGCGGCG ACCCACCGAG CTCCGAGCGG
CTCCGGCCGG GCGCGGAGAT CCCACTGGAA CGCACCCGGC CCGCCCTGGA CCTGACCGAG
CTGTTCCACG GCTTCCGACC CCTGTTTTCC GCATTGGACC CCGAGGAGGT CAACCAGCTG
TCGGGCGAGA TCATCCAGGT GTTGCAGGGG GAGAGCGGCA CGGTGGAGAG TCTGTTGCGC
CACACGGGGT CGCTCACCGA GACACTCGCC GACCGCGACC GGGTGATCGG CGAGGTCATC
ACGAACCTGA ACTCCGTACT CGAGACCATC AACAACGAGG GCGACGCGCT GTCGGGCCTC
GTCTCGACGT TGCAGGAACT GGTCTCGGGA CTGGCCGAGG ATCGCGAGGC CATCGGCGAG
TCGATCGAGG GCATGGCCGC CCTCACCACG GCCACGGCCG GCCTGTTCGA GCACGCCCGC
GAACCGTTGC GGGACAGCAT CGCCGGCTTA CGGGACGTCT CGACGAACCT CGTGTCCGGC
TCCGACGACC TGGAGCGGTT CCTCGTCACG ACCCCGAAGA AGTTCACCGA ACTGGGCCGC
GCGGCCTCGT ACGGGTCGTT TCTGAACGTC TACCTGTGTG ACGGAATCCT GCTGACCGAT
CCGCCGACGA ACATCAACGA CGGTCCCCTC CCGGCGAGGT GCACCCGATG A
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| Protein sequence | MRGLVGPLLK GLAFVLVTTV ATVLLAVSIS NVGVGQRVGY SARFTDVTSL NVGDDVRIAG
VRVGQVDGLE IIDRHIARVR FSVDATRPLP ADVTATIRYR NMLGQRYIAL ERGDPPSSER
LRPGAEIPLE RTRPALDLTE LFHGFRPLFS ALDPEEVNQL SGEIIQVLQG ESGTVESLLR
HTGSLTETLA DRDRVIGEVI TNLNSVLETI NNEGDALSGL VSTLQELVSG LAEDREAIGE
SIEGMAALTT ATAGLFEHAR EPLRDSIAGL RDVSTNLVSG SDDLERFLVT TPKKFTELGR
AASYGSFLNV YLCDGILLTD PPTNINDGPL PARCTR
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