Gene Svir_09100 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_09100 
Symbol 
ID8386247 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp933794 
End bp936025 
Gene Length2232 bp 
Protein Length743 aa 
Translation table11 
GC content67% 
IMG OID644975001 
Productpolyphosphate kinase 
Protein accessionYP_003132795 
Protein GI257054963 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0855] Polyphosphate kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.378192 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCGATG AGACCCAGGC ATCCCCGGCC ACCGGATTCG ACCAGAGCGA CAACGACCCG 
GGGCGTCGGT CCGCCACCAC CACGCCGCCG CCCGGGGCGA ACACCAGCCG CGCCTGCCCG
GTACCGTCCG CGCCTCCCGC CGCCACCGAC GTCGACCCCG CCGAGAACAC GCTTCCGGCC
GACCGTTACT TCAACCGGGA ACTCTCTTGG CAGGACTTCA ACGCGAGGGT GCTGGCGTTG
GCCGAGGACG AATCCCAGCC ACTGCTGGAA CGCGCCAAGT TCCTCGCCAT CTTCGCGTCC
AATCTGGACG AGTTCTACAT GGTTCGCGTG GCCGGGTTGA AACGCCGCGA ACAGACCGGC
CTGCCCGTCC GCAGCGCCGA CGGCCTCACC CCTTCCGAGC AGCTCGCCTA CGTGGCCGAA
CGGAACGCCG AACTGGTGCA GCGGCACGCG CAGGCGTTCG AGAAGGGGGT GCGGCCCGCA
CTGGCCGAGG CCGGTATCCG CATCGTCGCT TGGGCCGACC TCGGGGGCGA GGAACGAACC
CGCATGTCGG AGTACTTCAC CAAGCAGGTC TTCCCTGTGT TGACCCCGCT GGCCGTCGAC
CCGGCGCATC CGTTCCCCTA CATCTCCGGC CTCTCGCTCA ACCTCGCCGT GACCGTCCGC
GATCCCGAGG ACGGCACCGA ACGGTTCGCC AGGGTGAAGG TGCCCAACAA CGTCCCCCGG
CTCGTCCGCA TCGAGACCAG CCGGGATGCC CGCACCGCGA CGTTCCTTCC GCTGGAGGAA
CTCATCGCCG CGCACCTGGA CGAGCTGTTC AGCGGGATGC AGGTCAGCGA ACACCATGTC
TTCCGCGTCA CCCGCAACGC CGACTTCGAG GTCGAGGAGG ACCGCGACGA GGACCTGCTC
CAGGCTCTGG AACGGGAACT CGCGCAACGT CGGTTCGGCC CGCCCGTGCG GCTGGAGGTC
GCCAGCGACA TGAGCGAGCA CGTGCTCGAA CTCCTGCTGC GCGAACTGGA GGTCGACCCC
CAGGACGTGG TGGCCGTCCC GGGCCTGCTC GACCTCAGCT GCCTGCATCA GCTGTACTCG
TTGGACCGCA AGGAACTCAA GCACCCCCCG TTCGTCCCCG CCACCCACCC CGCGTTCGGG
GAGCACGAGA CGCCCAAGAG CGTGTTCGCG ACCCTGCGTG AGGGGGACGT GCTGGTGCAG
CACCCGTATC ACTCGTTCTC CACGAGCGTG CAACGGTTCA TCGAGCAGGC CGCCGCGGAC
GACAAGGTCC TGGCCATCAA GCAGACGCTG TACCGCACGT CCGGGGAATC GGGCGAGTCA
CCGATCGTGG ACGCGCTCAT CGACGCCGCC GAAGCCGGGA AACAGGTCGT GGCGTTGGTG
GAGATCAAGG CACGGTTCGA CGAACACGCC AACATCGCCT GGGCTCGCAC CTTGGAACGC
GCGGGGGTGC ACGTCGTCTA CGGACTCGTC GGACTCAAGA CGCACTGCAA GATCGCGCTC
GTCATACGCC AGGAAGGGAG CACGATCCGC CGCTACTGCC ATGTCGGCAG CGGCAACTAC
AACCCCAGGA CCGCGCGTCA GTACGAGGAC ATCGGATTGT TCACCGCCGA CCCCGACATC
GGCACCGACC TGACCGACCT GTTCAACGTC CTCACCGGAT ACTCCCGGCA GCAGACGTAC
CGCAACATCC TCACCTCCCC CAACGGCATC CGGCGGGGGC TGCTGGAGTT CATCGACAAC
GAGATCGCGT TCGCCAAGGC CGGTGAACCG TCCGGCATCC GCATCAAGTG CAACGCCCTG
GTCGACGAAC AGATCATCGA CAGTCTCTAT CGGGCCTCAC AGGCGGGCGT CCCGGTCGAG
GTGGTGGTGC GGGGCATCTG CGCCCTCAAA CCCGGCGTGC CCGGCCTGAG CGACAACATC
ACCGTGCGCT CCATCCTCGG CCGTTTCCTG GAGCACTCCC GCATCTTCCA CTTCCGGGGA
GCGAACACCC ACTGGATCGG CAGCGCCGAC ATCATGCACC GCAACCTCGA CCGCCGTATC
GAGGCACTCG TGCGGGTAAC CGACCCGAAA CTCACCGCAC AACTCGATAC CGTCCTCAAC
TCCGCGTTGG ACCCCATGAC CCGGTGCTGG GTCCTTCAAC CCACGGGCGA ATGGGTACCC
TCTCCCACGG ACAGCGGCCA AGTCCGCGAC CATCAGTTGG AAATGCTGCG CAAGCACGGA
GCCTCAGGGT GA
 
Protein sequence
MSDETQASPA TGFDQSDNDP GRRSATTTPP PGANTSRACP VPSAPPAATD VDPAENTLPA 
DRYFNRELSW QDFNARVLAL AEDESQPLLE RAKFLAIFAS NLDEFYMVRV AGLKRREQTG
LPVRSADGLT PSEQLAYVAE RNAELVQRHA QAFEKGVRPA LAEAGIRIVA WADLGGEERT
RMSEYFTKQV FPVLTPLAVD PAHPFPYISG LSLNLAVTVR DPEDGTERFA RVKVPNNVPR
LVRIETSRDA RTATFLPLEE LIAAHLDELF SGMQVSEHHV FRVTRNADFE VEEDRDEDLL
QALERELAQR RFGPPVRLEV ASDMSEHVLE LLLRELEVDP QDVVAVPGLL DLSCLHQLYS
LDRKELKHPP FVPATHPAFG EHETPKSVFA TLREGDVLVQ HPYHSFSTSV QRFIEQAAAD
DKVLAIKQTL YRTSGESGES PIVDALIDAA EAGKQVVALV EIKARFDEHA NIAWARTLER
AGVHVVYGLV GLKTHCKIAL VIRQEGSTIR RYCHVGSGNY NPRTARQYED IGLFTADPDI
GTDLTDLFNV LTGYSRQQTY RNILTSPNGI RRGLLEFIDN EIAFAKAGEP SGIRIKCNAL
VDEQIIDSLY RASQAGVPVE VVVRGICALK PGVPGLSDNI TVRSILGRFL EHSRIFHFRG
ANTHWIGSAD IMHRNLDRRI EALVRVTDPK LTAQLDTVLN SALDPMTRCW VLQPTGEWVP
SPTDSGQVRD HQLEMLRKHG ASG