| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_09060 |
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| Symbol | |
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| ID | 8386243 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | + |
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| Start bp | 929643 |
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| End bp | 931058 |
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| Gene Length | 1416 bp |
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| Protein Length | 471 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644974997 |
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| Product | 3-isopropylmalate dehydratase, large subunit |
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| Protein accession | YP_003132791 |
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| Protein GI | 257054959 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0065] 3-isopropylmalate dehydratase large subunit |
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| TIGRFAM ID | [TIGR00170] 3-isopropylmalate dehydratase, large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.918212 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGAGA AGCGGGGCCG CACACTGGCG GAAAAGGTGT GGGACGCACA CGTGGTGCGT
CGCGGCGAGG GCGCCGAACC CGACTTGCTC TACATCGACC TGCACCTCGT CCACGAGGTC
ACCAGCCCGC AGGCATTCGA CGGGCTGCGG CTGGCGGGAC GCAAGGTGCG GCGTCCGGAT
CTCACGATCG CCACGGAGGA CCACAACGTC CCCACGACCG GCATCGATCT GCCCATCGCC
GACCCGGTGT CGCGTACGCA GGTCGAGACA TTGCGGCGCA ACTGCGAGGA GTTCGGCATC
CGGTTGCACC CGATGGGGGA TGACGAACAG GGCATCGTGC ACGTCATCGG CCCCCAGCTC
GGCCTCACCC AGCCCGGTAT GACCGTGGTG TGCGGCGACA GCCACACGTC CACGCACGGC
GCGTTCGGGG CGATGGCCTT CGGTATCGGC ACCTCCGAGG TGGAGCACGT ACTGGCCACC
CAGACCCTGC CGATGCGGCC GTTCAAGACC ATGGCGGTCA ACGTGGACGG TCAGTTGCGT
CCCGGTGTGA CGGCCAAGGA CATCATCCTC GCGGTCATCG CGAAGATCGG TACGGGCGGC
GGTCAGGGCC ACGTCATCGA GTACCGGGGC AGCACCATCG AAGCGCTGTC GATGGAAGCC
CGCATGACCA TCTGCAACAT GTCCATCGAG GCCGGCGCCC GGGCGGGCAT GATCGCGCCG
GACGAGACGA CGTTCGCCTA TCTGAAGGAC CGGCCGCACG CGCCGCAGGG CGCCGATTGG
GACGCCGCCC TCGCCGAGTG GCGGGAATTG CGCACCGACG ACGACGCCGT GTTCGACACC
GAGGTGCACC TCGACGCCTC CGAGCTCACC CCGTTCGTGA CGTGGGGTAC CAACCCGGGT
CAGGGGTTGC CGCTGTCGGA GTCCGTGCCC GACCCCGAGC AGATGACCGA CGAGACCGAG
CGTCTCGCCG CCGAGAAGGC CCTGTCCTAT ATGGATCTCA AGCCGGGGAC GCCGCTGCGG
GAGATCGCGG TGGACACCGT GTTCCTCGGT TCGTGCACCA ACGGTCGCCT GGAGGACCTC
CGCGCCGCCG CCGAGGTGCT GAAGGGCCGG AAGGTGGCCG ACGGGGTGCG GATGCTCGTC
GTGCCCGGTT CCATGCGGGT GCGTAAGGCC GCCGAGGAAG AGGGGCTGCA CGAGGTCTTC
ACGGAAGCGG GCGCGGAGTG GCGTGCCGCC GGGTGTTCGA TGTGCCTGGG CATGAACCCG
GACCAACTGA AGCCCGGGGA GCGCAGCGCC TCGACCTCCA ACCGCAACTT CGAGGGCCGA
CAGGGCAAGG GCGGCAGGAC CCACCTGGTG TCGCCGCTCG TGGCCGCCGC GACCGCTGTG
CGCGGCACCC TGTCCTCGCC CGAGGACCTC GATTGA
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| Protein sequence | MTEKRGRTLA EKVWDAHVVR RGEGAEPDLL YIDLHLVHEV TSPQAFDGLR LAGRKVRRPD
LTIATEDHNV PTTGIDLPIA DPVSRTQVET LRRNCEEFGI RLHPMGDDEQ GIVHVIGPQL
GLTQPGMTVV CGDSHTSTHG AFGAMAFGIG TSEVEHVLAT QTLPMRPFKT MAVNVDGQLR
PGVTAKDIIL AVIAKIGTGG GQGHVIEYRG STIEALSMEA RMTICNMSIE AGARAGMIAP
DETTFAYLKD RPHAPQGADW DAALAEWREL RTDDDAVFDT EVHLDASELT PFVTWGTNPG
QGLPLSESVP DPEQMTDETE RLAAEKALSY MDLKPGTPLR EIAVDTVFLG SCTNGRLEDL
RAAAEVLKGR KVADGVRMLV VPGSMRVRKA AEEEGLHEVF TEAGAEWRAA GCSMCLGMNP
DQLKPGERSA STSNRNFEGR QGKGGRTHLV SPLVAAATAV RGTLSSPEDL D
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