Gene Svir_08590 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_08590 
Symbol 
ID8386196 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand- 
Start bp879597 
End bp880304 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content68% 
IMG OID644974950 
Producttranscriptional regulator 
Protein accessionYP_003132746 
Protein GI257054914 
COG category[K] Transcription 
COG ID[COG1802] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.713725 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGCAGA TCGACACCGA CCGGAATCTC GCGAAGGCCA TTCTCGACGA GTTGAGGGGC 
GCGATCGTCA GCGGGGAACT CGTGCCGGGG ACCCTGTACT CGGTGCATGA CCTCGCCGCC 
CGGCTCGGGG TGTCGCGCAC GCCCGTACGG GAAGCGCTCA TCCAGTTGGC CGAACGGGGC 
ATGGTGCGGT TCGAACGCAA CCGGGGCATC CGCGTGTTGC AGACGTCGCT GCACGATCTG 
GAGGAGATCT TCGCGATCCG GCTGCTGCTG GAGGTGCCCG CCACGTTCCG GGCGACCAGT 
CAGGGCACGC CGGGGTTGGT GACCGATCTG CACACCCACC TCGGCGCCAT GCGGCGGGCG 
GCCGAGGCCC GCGACGAGGC CGAGTTCATG GCCGCCGATC GACGGTTCCA CGAGGCCATC 
AACGTCGCGT CGGGCAATTT GCGGCTGGCC CGCTACGTCG ATTCGTTGCG GGACATGGTG 
TTCCTGCGCG GAACTTCCAC TGTGGACCGA AGCCGGGGAT TGGACGACAT CCTCGCCGAA 
CACGAAAAGA TCGCCGCGTT CGTCGAGCAG GGCAAGCCCA CGGAGGCGGC CGAGGCCATG 
CGACGGCATC TGCTCACCAC CGCCCAGCTG CTCATCGCGC AGGAGTCCGC CGAGGCCGGC 
GAACCCGTGT CTTTCGTGTC CTACGACTGG ACCCGGTTGT CGGGCTGA
 
Protein sequence
MRQIDTDRNL AKAILDELRG AIVSGELVPG TLYSVHDLAA RLGVSRTPVR EALIQLAERG 
MVRFERNRGI RVLQTSLHDL EEIFAIRLLL EVPATFRATS QGTPGLVTDL HTHLGAMRRA 
AEARDEAEFM AADRRFHEAI NVASGNLRLA RYVDSLRDMV FLRGTSTVDR SRGLDDILAE 
HEKIAAFVEQ GKPTEAAEAM RRHLLTTAQL LIAQESAEAG EPVSFVSYDW TRLSG