Gene Svir_07620 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_07620 
Symbol 
ID8386100 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand+ 
Start bp787675 
End bp788280 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content63% 
IMG OID644974856 
Productpredicted metal-dependent hydrolase 
Protein accessionYP_003132654 
Protein GI257054822 
COG category[R] General function prediction only 
COG ID[COG1451] Predicted metal-dependent hydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value0.966751 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.648637 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCCGATG CACGGGTTCC CTCGCTCAGG AATCGGAACA GGACACAGCG GAACACTCGG 
AACTCTCGAC ACTCCGCTGA GAACGAGCAG AAGGTTGAGG TTCGGCGGAG CCCTCGCCGC 
CGCCGAACGG TCACCGCGTA CCGAGACGGT GACACGATGG TCGTGCTGAT CCCCGCCACC 
ATGACCAAGG CGGAGGAGAA GCATTGGGTT GCCGAGATGC AGCGCAAGCT CCAACGCGCG 
GAAAGTCGAC GGACAAGCCC AGCACGAGCA TCGGATGAAG CACTGCTGTT GCGCTGTACG 
CAACTATCGC AGCGCTATCT CGACGGCATA GCGCAGCCTA CGAGTGTGCG GTGGGTACCG 
CCGATGCGTA CCCGTTGGGC GTCCTGTACC CCGGCCGACC GAACCATCCG CGTGAGCGAA 
CGGCTTCGTG ACGTGCCGTC GTGGGTGCTC GACTACGTCC TCGTGCACGA GTTGGCGCAT 
CTGCGGGTAG CCGAGCACAA CCGTGAGTTC TGGAACCTGG TCAACAGGTA CCCGAAAACC 
GAACGGGCTA TCGGGTATCT CGAAGGTCTT TCCGCCGCCG AACGACTCGG AGTCTCATCC 
CTCTGA
 
Protein sequence
MADARVPSLR NRNRTQRNTR NSRHSAENEQ KVEVRRSPRR RRTVTAYRDG DTMVVLIPAT 
MTKAEEKHWV AEMQRKLQRA ESRRTSPARA SDEALLLRCT QLSQRYLDGI AQPTSVRWVP 
PMRTRWASCT PADRTIRVSE RLRDVPSWVL DYVLVHELAH LRVAEHNREF WNLVNRYPKT 
ERAIGYLEGL SAAERLGVSS L