Gene Svir_07360 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_07360 
Symbol 
ID8386074 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp756401 
End bp757300 
Gene Length900 bp 
Protein Length299 aa 
Translation table11 
GC content67% 
IMG OID644974831 
Productketopantoate hydroxymethyltransferase 
Protein accessionYP_003132632 
Protein GI257054800 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0413] Ketopantoate hydroxymethyltransferase 
TIGRFAM ID[TIGR00222] 3-methyl-2-oxobutanoate hydroxymethyltransferase 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.604675 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCACAGG ACAATGCGCA ACCCGCGCAC CAGCACGAGA CGGAAACCCC CGCCCCTTAC 
GGTGCCGCAC CCGGCACTCC CACCGAATCG GCGACGCCGC CGCGTAAGCG GGTCCGCATC
CACCACCTGC GGGAGCTGAA GGAACGGGGC GAGCCCTGGC CCATGCTCAC CGCCTACGAC
ACCTACACCG CCCGACTTTT CGACGAAGCG GGCATCCCGG TGCTGCTGGT GGGGGACTCA
GCCGCCAACA CGGTGTACGG CTACGAATCC TCACTACCGA TCACGGTGGA GGAGATGCTG
CCCCTGGTCC GGGCCGTGAC ACGCTCGGTG TCGAAGGCAC TCGTGGTGGC CGACCTGCCG
TTCGGCTCCT ACCAGGTGTC ACCGGAACAG GCCGTGGCCA CGGCGGCGCG GTTCATGAAG
GAAGGCCGCG CTCACGCCGT CAAACTGGAA GGCGGTCGCA AGTTCGCACC GCACGTGGAA
GCGGTGACCG CGGCCGGTGT CCCGGTGATG GGTCACATCG GATTCACCCC ACAAAGCGAA
CACAACCTCG GTGGCTACCG CGTCCAAGGC CGGGGTGACA CGGGAGACGC CCTCATCGCC
GACGCCTTGG CCCTGCAGGA CGCGGGTGCG TTCGCGGTGG TGATGGAAAT GGTGCCCGCC
GAGATCGCCA AGCAGATCAC CCACGAACTG CACATCCCCA CCGTGGGGAT CGGTGCCGGC
CCGGACTGCG ACGCCCAGGT CCTCGTGTGG CAGGACATGG CCGGACTGCG CACCGGCCGC
GTACCACGGT TCGTCAAGCA GTACGCCGAT CTCGCCGGAG TGTTGACCAC CGCGGTGAAG
GCGTTCGCCG ACGACGTGCG TAACAGGACG TTCCCAGCAC CCGAGCACAC CTTCCACTGA
 
Protein sequence
MSQDNAQPAH QHETETPAPY GAAPGTPTES ATPPRKRVRI HHLRELKERG EPWPMLTAYD 
TYTARLFDEA GIPVLLVGDS AANTVYGYES SLPITVEEML PLVRAVTRSV SKALVVADLP
FGSYQVSPEQ AVATAARFMK EGRAHAVKLE GGRKFAPHVE AVTAAGVPVM GHIGFTPQSE
HNLGGYRVQG RGDTGDALIA DALALQDAGA FAVVMEMVPA EIAKQITHEL HIPTVGIGAG
PDCDAQVLVW QDMAGLRTGR VPRFVKQYAD LAGVLTTAVK AFADDVRNRT FPAPEHTFH