Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_07360 |
Symbol | |
ID | 8386074 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | - |
Start bp | 756401 |
End bp | 757300 |
Gene Length | 900 bp |
Protein Length | 299 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644974831 |
Product | ketopantoate hydroxymethyltransferase |
Protein accession | YP_003132632 |
Protein GI | 257054800 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0413] Ketopantoate hydroxymethyltransferase |
TIGRFAM ID | [TIGR00222] 3-methyl-2-oxobutanoate hydroxymethyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.604675 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCACAGG ACAATGCGCA ACCCGCGCAC CAGCACGAGA CGGAAACCCC CGCCCCTTAC GGTGCCGCAC CCGGCACTCC CACCGAATCG GCGACGCCGC CGCGTAAGCG GGTCCGCATC CACCACCTGC GGGAGCTGAA GGAACGGGGC GAGCCCTGGC CCATGCTCAC CGCCTACGAC ACCTACACCG CCCGACTTTT CGACGAAGCG GGCATCCCGG TGCTGCTGGT GGGGGACTCA GCCGCCAACA CGGTGTACGG CTACGAATCC TCACTACCGA TCACGGTGGA GGAGATGCTG CCCCTGGTCC GGGCCGTGAC ACGCTCGGTG TCGAAGGCAC TCGTGGTGGC CGACCTGCCG TTCGGCTCCT ACCAGGTGTC ACCGGAACAG GCCGTGGCCA CGGCGGCGCG GTTCATGAAG GAAGGCCGCG CTCACGCCGT CAAACTGGAA GGCGGTCGCA AGTTCGCACC GCACGTGGAA GCGGTGACCG CGGCCGGTGT CCCGGTGATG GGTCACATCG GATTCACCCC ACAAAGCGAA CACAACCTCG GTGGCTACCG CGTCCAAGGC CGGGGTGACA CGGGAGACGC CCTCATCGCC GACGCCTTGG CCCTGCAGGA CGCGGGTGCG TTCGCGGTGG TGATGGAAAT GGTGCCCGCC GAGATCGCCA AGCAGATCAC CCACGAACTG CACATCCCCA CCGTGGGGAT CGGTGCCGGC CCGGACTGCG ACGCCCAGGT CCTCGTGTGG CAGGACATGG CCGGACTGCG CACCGGCCGC GTACCACGGT TCGTCAAGCA GTACGCCGAT CTCGCCGGAG TGTTGACCAC CGCGGTGAAG GCGTTCGCCG ACGACGTGCG TAACAGGACG TTCCCAGCAC CCGAGCACAC CTTCCACTGA
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Protein sequence | MSQDNAQPAH QHETETPAPY GAAPGTPTES ATPPRKRVRI HHLRELKERG EPWPMLTAYD TYTARLFDEA GIPVLLVGDS AANTVYGYES SLPITVEEML PLVRAVTRSV SKALVVADLP FGSYQVSPEQ AVATAARFMK EGRAHAVKLE GGRKFAPHVE AVTAAGVPVM GHIGFTPQSE HNLGGYRVQG RGDTGDALIA DALALQDAGA FAVVMEMVPA EIAKQITHEL HIPTVGIGAG PDCDAQVLVW QDMAGLRTGR VPRFVKQYAD LAGVLTTAVK AFADDVRNRT FPAPEHTFH
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