Gene Svir_07180 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_07180 
Symbol 
ID8386056 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp739291 
End bp740013 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content68% 
IMG OID644974814 
Producttranscriptional regulator 
Protein accessionYP_003132615 
Protein GI257054783 
COG category[K] Transcription 
COG ID[COG1414] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.268445 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGATCAT CGGCTACCAC GCACACGACG AGGAACCGGA TGAGCACCCT GCAAACCCTT 
GACCGAGGTC TGCGCGCGCT GGACATCATC TCGCAGAGTC CGGCCGGTAT CTCGGTGAGC
GAGTTGGCCA CCGAGCTGGG CGTCCACCGT GCCATCTGCT ATCGCGTCGT GGCGACACTG
GAGGCGCACT CCCTGATCAC CCGCACCGGC GACGGCAAGC TCCGCCTCGG GGTCGGCGCG
GCCGTGCTCG CCTCCCGCTT CGAACCCCAG TTCATGCACG GGGCGCATCC GATCCTGCAG
GAACTGGCCG AACGCACCAG GGCGACCGCG TTCATCGCCG CGGCCGAAGC GGACACGTGT
GTGGTGATCA TGGTGGCCGA ACCGAGCGAG GCGGTCCTCC GGGTCGGCTA TCGGGTCGGG
ACCCGGCATC CGCTGGACAA GGGCGCGTCC GGTATCGCGA TCCTCGCGCT GCGACCGGAA
CGCCGCAGCG ATCCCGAACT CGTCAAACAG GCCCGTAAGG ACGGTTACAG CGTCACCTTC
GGGCAGCTCA ACCGAGGTGC GGTCGGCGTC TCGTCCGGGA TCCGTGTCCC GGGAGGGGCT
TCACCGGGGT CCCCGTTGGA ACGCAGCGTG GGTGTCGTGG CCATCGAGGG CCTCGACACC
GAGAAGGCCG CCCGCGAGGT CGTATGGGCT TCGCAGCAGC TCTCCCAGTT GATCACGGGC
TGA
 
Protein sequence
MRSSATTHTT RNRMSTLQTL DRGLRALDII SQSPAGISVS ELATELGVHR AICYRVVATL 
EAHSLITRTG DGKLRLGVGA AVLASRFEPQ FMHGAHPILQ ELAERTRATA FIAAAEADTC
VVIMVAEPSE AVLRVGYRVG TRHPLDKGAS GIAILALRPE RRSDPELVKQ ARKDGYSVTF
GQLNRGAVGV SSGIRVPGGA SPGSPLERSV GVVAIEGLDT EKAAREVVWA SQQLSQLITG