| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_06540 |
|---|
| Symbol | |
|---|
| ID | 8385992 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharomonospora viridis DSM 43017 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013159 |
|---|
| Strand | - |
|---|
| Start bp | 667432 |
|---|
| End bp | 668523 |
|---|
| Gene Length | 1092 bp |
|---|
| Protein Length | 363 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 644974751 |
|---|
| Product | Mg2+/Co2+ transporter |
|---|
| Protein accession | YP_003132552 |
|---|
| Protein GI | 257054720 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0598] Mg2+ and Co2+ transporters |
|---|
| TIGRFAM ID | [TIGR00383] magnesium Mg(2+) and cobalt Co(2+) transport protein (corA) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 41 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCGCCA TTTCCTCCCT CGGCAATCTG CGCGGCCGAG CCCACGGCCG TGCCTCCCGT
GACCGTCGCC GCACGGGGCA GGAAAAGCAG ACCTCCGCCT GTGTCGTCGA CTGTGGTGTC
TACATCAACG GTGTGCGGCA GCCCGGCGAG TGGTCCCATG CCGAGGCCAT CGCCGAAGTG
CGCAAACGCG GCGAAGGCTT CGTGTGGATC GGACTGCACG AACCCGACGA GAAGCAGATC
CAGGGCATCG CCGAGACGTT CGGTCTGCAC GAACTCGCCG TCGAGGACGC CGTGCACGCC
CATCAACGGC CGAAACTGGA ACGCTACGAC GACACGCTGT TCATGGTGTT CCGCACCATC
CGCTACGTCG AACACGACTC GCCCACCACC GCCAACGAGA TCGTCGAATC CGGCGAGCTG
ATGGCGTTCC TCGGCTCCGA TTTCATCATC ACCGTGCGGC ACGGCAACCA CGCCGGACTG
ACGCATCTAC GCAGGGAGCT CGACGCCGAC CCCGAACGCC TCCTCCCCGG ACCGGCGGCG
GTGTTGCACG CCATCGCCGA CTACGTGGTC GACCACTTCC TCGTCGTCAC CGAACGCATC
GAGGACGACA TCGACGAGAT GGAGACCGAG GTCTTCGCGC CTCGCACGCG CATCACCTCG
GAACAGATCT ACCTGTTCAA GCGTGAGGTA TTGGAACTAC GCCGAGCCGT GCTGCCCCTG
GCCAGGCCGT TGCGCAGACT GGCCGAGGGC CACAGTCGCC TGATCCCCGA GGAGATCCGG
TCGTACTTCC GCAACGTGCA CGACCACGTC ACGACCGTGT CCGAAAGGGT GTCCGCCTTC
GACGAGCTGC TGACCACCCT GGTCGACGCC ACCCTCGGCA AGCTCACGCT CCAACTGAAC
TCGGACATGC GCAAGATCAC GGCGTGGGCC GCGATCATCG CCGTGCCCAC CGCCATCGCG
GGGATCTACG GCATGAACTT CGACTACATG CCCGAGCTGG GTTTCAAGTA CGGCTACCCG
CTCACACTCG GCGTGATCCT CGCCCTCTGT CTGTTGCTGT ACCGGATATT CCGCAAAAAC
CGCTGGCTCT GA
|
|---|
| Protein sequence | MPAISSLGNL RGRAHGRASR DRRRTGQEKQ TSACVVDCGV YINGVRQPGE WSHAEAIAEV
RKRGEGFVWI GLHEPDEKQI QGIAETFGLH ELAVEDAVHA HQRPKLERYD DTLFMVFRTI
RYVEHDSPTT ANEIVESGEL MAFLGSDFII TVRHGNHAGL THLRRELDAD PERLLPGPAA
VLHAIADYVV DHFLVVTERI EDDIDEMETE VFAPRTRITS EQIYLFKREV LELRRAVLPL
ARPLRRLAEG HSRLIPEEIR SYFRNVHDHV TTVSERVSAF DELLTTLVDA TLGKLTLQLN
SDMRKITAWA AIIAVPTAIA GIYGMNFDYM PELGFKYGYP LTLGVILALC LLLYRIFRKN
RWL
|
|---|
| |