Gene Svir_06200 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_06200 
Symbol 
ID8385958 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp636968 
End bp637579 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content71% 
IMG OID644974717 
Productconserved hypothetical protein TIGR00370 
Protein accessionYP_003132518 
Protein GI257054686 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2049] Allophanate hydrolase subunit 1 
TIGRFAM ID[TIGR00370] conserved hypothetical protein TIGR00370 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.288812 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCCTGC TGCCGTGCGC CGATGCGGGA CTGCTCGTGG AACTCGACGA CCTCGACCAG 
GTCCTGGGAC TGCATGCGGC CCTGCAGGCC GATCCTCCCC CGGGAGTCGT CGATCTGGTG
CCCGCGGCTC GCACCCTGTT GCTGCGGTTC GACCCAGACA CGGCCGACGC CGACGAGATC
GAACGCGCCG TGCGTCGGGC GCGTCCCACA CGTGTGGCCG AGCGGGAGGC CGAACTCGTG
GAGATACCGG TCACCTACGA CGGCGAGGAC CTCGCCGAAG TCGCCTCGAT GGCCGGGCTG
ACGCCTCGGC AGGTCGTCGC CGCCCACACC GGCACCGAGT GGACCGTGGC GTTCGGCGGA
TTCGCCCCCG GGTTCGGGTA CCTGACCGGC GCGATGTGGC CTTTCGACAT CCCTCGCCGG
ACGGAGTCCC GAACCACCGT GCCCGCGGGG GCCGTCGCGC TGGCGGGAGC GTTCAGCGGT
GTCTACCCCA GGTCCTCGCC GGGGGGCTGG CAACTCATCG GACGCACCGA GCTGATCATG
TGGGACACCG ATCGTGACCC ACCCGCGTTG CTGCGGCCCG GGGTGCGCGT GCGGTTCGTG
GAGGTCCGCT GA
 
Protein sequence
MRLLPCADAG LLVELDDLDQ VLGLHAALQA DPPPGVVDLV PAARTLLLRF DPDTADADEI 
ERAVRRARPT RVAEREAELV EIPVTYDGED LAEVASMAGL TPRQVVAAHT GTEWTVAFGG
FAPGFGYLTG AMWPFDIPRR TESRTTVPAG AVALAGAFSG VYPRSSPGGW QLIGRTELIM
WDTDRDPPAL LRPGVRVRFV EVR