Gene Svir_06150 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_06150 
Symbol 
ID8385953 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp632170 
End bp633318 
Gene Length1149 bp 
Protein Length382 aa 
Translation table11 
GC content71% 
IMG OID644974712 
Productglycosyltransferase 
Protein accessionYP_003132513 
Protein GI257054681 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.369332 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCCGAAC CGCGTGTGTT GATCGACGCT ACGGCCGTAC CGGCCGATCG TGGAGGGGTG 
GGTCGGTACG TCGATTCCCT CATCGCCGCG CTCGACGAGG GCGGCGCCCG CCTCACCGTG
GTCTGCCAGG CCCGTGACGC ACAGCTGTAC TCCGAGCTGG CGCCGCACGC GCGGGTGGTG
CATACCGCCC AGTCCGCGGC CACCCGGACC GCGCGGCTGA CGTGGGAACA GACCACCCTG
CCCGGCCTGG CGCGCAGGCT CGCCGTCGAC GTCGTGCACT CCCCGCATTA CACGATGCCC
CTGGCGGGCC GCACGGCCTC GGTGGTGACC CTGCACGACG CGACGTTCTT CACCGACGCG
GGACTGCACT CCTCGGTGAA AGCGCGGTTC TTCCGAGCGT GGACGGTGAC GGCGTTGCGT
CGTGCGACAC TGTGCGTGGT CCCCAGCTTC GCCACCGCCG AGGAGTTACG TCGGGTCACC
CGGGTACGCG ACGCGGAGCT GCGGGTGATC CAGCATGGGG TCGACGTCAA CCGGTTCCAC
CCGCCGACGG CGGAGGAGAT ACAGGCGGCC CGCGACGTGG TGGGACTGGG CGCCATGCCG
TATCTGGCGT TCCTCGGTGC GCTCGAACCG CGCAAGAACG TACCGGCGTT GATCAGGGGT
TTCTCGCTGG CGGTGGCCGA CCGGCCCGAT CCCCCCGCGC TGGTGCTGGC CGGGCAACCG
GGATGGGACT CCCAAGTGGA GAGTGCCCTC GCCGCGGCCC CGTTGAGACT CCGGGTGATC
CGAGCGGGAT ACCTGCCGTA CGACACGCTC GCCGGGTTCC TCGGTGGGGC GGAACTCGTG
GCGTATCCGA GTCTCGGGGA GGGATTCGGG CTGCCCGTGC TGGAGGCGAT GGCCTCCGGT
GCCTGCGTGC TGACCACACG CCGTCTCGCG CTGCCCGAAG TGGGTGGCGA CGCCGTGGCG
TACTGCGGAG TCGGAGCGGG GGACATCGCC GCCGCCCTGC GGGAGCTGCT CGACAACCCG
GGCCGTCGGG CTGAACTGAT GCAGGCCGCG CTGCGCCGGG CCAAGGAGTT CTCCTGGGCC
ACCAGCGCCG CTTTGCACCG GGAGGCCTAC GACCGGGCCT GGCACAAGCA TCGCCGAGCC
AAGGCGTGA
 
Protein sequence
MPEPRVLIDA TAVPADRGGV GRYVDSLIAA LDEGGARLTV VCQARDAQLY SELAPHARVV 
HTAQSAATRT ARLTWEQTTL PGLARRLAVD VVHSPHYTMP LAGRTASVVT LHDATFFTDA
GLHSSVKARF FRAWTVTALR RATLCVVPSF ATAEELRRVT RVRDAELRVI QHGVDVNRFH
PPTAEEIQAA RDVVGLGAMP YLAFLGALEP RKNVPALIRG FSLAVADRPD PPALVLAGQP
GWDSQVESAL AAAPLRLRVI RAGYLPYDTL AGFLGGAELV AYPSLGEGFG LPVLEAMASG
ACVLTTRRLA LPEVGGDAVA YCGVGAGDIA AALRELLDNP GRRAELMQAA LRRAKEFSWA
TSAALHREAY DRAWHKHRRA KA