| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_05920 |
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| Symbol | |
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| ID | 8385930 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | + |
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| Start bp | 604690 |
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| End bp | 605634 |
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| Gene Length | 945 bp |
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| Protein Length | 314 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644974689 |
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| Product | hydroxymethylglutaryl-CoA lyase |
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| Protein accession | YP_003132490 |
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| Protein GI | 257054658 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.935262 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCGTGC GTGAACTGGG GCTTCCGGAA CGGTTCCCCC ATGACGGTTC GCTGCCGGAG
CGGGTGACGA TCTGGGAGGT CGGGCCTCGC GACGGCTTGC AGAACGAGCG GACCACCGTG
CCCGTCGACG TGAAGTTGGA GTTCCTCGAC AGGCTGGCCG ACGCCGGGCT CACGACGGTG
GAGGCGACCA GCTTCGTGCA TCCGAAGTGG GTGCCGCAGC TGGCCGACGC AGAGGAACTG
CTCGCCCGAC TGCGGCGTCG TGACGGGGTG CGTTACCCGG TGTTGGTGCC CAACGAGCGG
GGCCTCGACC GCGCCCTGGC GGCGGGGGTC ACGCACGTGG CCGTGTTCGC CAGCGCCACC
GAATCCTTCG CGCGGCGCAA TCTGAATTCC GGTCTCGACG CGCAGTTCGC CATGTTCGAA
CCGGTGATCG CTCGTGCGCG GGAGGCCGGG CTCGACGTCA GGGGCTACGT GTCCATGTGC
TTCGGCGACC CCTGGGAGGG GATCGTCCCC ACCGAACAGG TCGTGACGGT GGGCAGGCGG
CTGCTGGACG CGGGCTGCAC CCAGCTGTCG TTGGGGGACA CCATCGGCGT GGCCACCGCG
GCCGCCGTCG AACGGCTGCT CGACGCGTTC ATCGAGGGCG GCGTCGCGAT CGCCGATCTG
GCCGTGCACT TCCACGACAC CTACGGGCAG GCGTTGGCCA ACACGCTCGC CGCGCTCCGC
AAGGGGGTGA CCACCGTGGA TGCCTCGGCC GGAGGCCTGG GCGGATGCCC CTATGCGGAG
TCGGCCACCG GCAATCTCGC GACCGAGGAC CTGGTGTGGC TGCTCGACGG TCTCGGCGTG
GAGCACGGCG TCGACCTCGA CGCGCTCGTG GAGACCAGCC GATGGATGTC GCGACAGCTG
GGTAGGTCGA GCCCGTCCCG GGTCGTTCGG GCGCTGTCCG GATAG
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| Protein sequence | MGVRELGLPE RFPHDGSLPE RVTIWEVGPR DGLQNERTTV PVDVKLEFLD RLADAGLTTV
EATSFVHPKW VPQLADAEEL LARLRRRDGV RYPVLVPNER GLDRALAAGV THVAVFASAT
ESFARRNLNS GLDAQFAMFE PVIARAREAG LDVRGYVSMC FGDPWEGIVP TEQVVTVGRR
LLDAGCTQLS LGDTIGVATA AAVERLLDAF IEGGVAIADL AVHFHDTYGQ ALANTLAALR
KGVTTVDASA GGLGGCPYAE SATGNLATED LVWLLDGLGV EHGVDLDALV ETSRWMSRQL
GRSSPSRVVR ALSG
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