Gene Svir_05910 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_05910 
Symbol 
ID8385929 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp604092 
End bp604703 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content65% 
IMG OID644974688 
Productpredicted membrane protein 
Protein accessionYP_003132489 
Protein GI257054657 
COG category[S] Function unknown 
COG ID[COG3428] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.697555 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTTCGAGG TGGCGTATCC CGACCGTCTG CTCAGCGAGG GCGAGCAGGT CGTGGCACAC 
AAGCATCCAC ATTTCAAGAT GCTGATCTTC CCCACGCTCG CGCTCGTGGT GACGGCGGTG
GCCGGGGGGT ATCTCGCCTG GCAGGCCACC GATTTCGCGG CTCCGTGGGA CACCGTGGTG
TTGATCACCA TCGCCGTTGT GGGCGGCATC CTCATCGTCT GGTTGTTCTT GACGCCGTTC
GTCCGGTGGC GCACCACGCA CTTCGTCGTC ACCACCGACC GCGTGATCGT CCGGGAGGGC
GTGATCAAAC GCACCGGGAT CGACATCCCG ATGGGCCGCA TCCACAGCGT GCGGTTCGAA
CACGGGCTCG TCGATCGCAT CTTCGGCTGC GGCACGCTCA TCATCGAGTC CGCGTCGGAC
GAACCGTTGA CCTTCGACGA CATCCCGCAG GTCGAGAGGA TGCACACCTA CATCTACCGT
CAGGTCAACG ACAACCCCTA CGACGACTAC GGTGCCCCCG GCGTCCGCGA CGAACCGCAC
GCGCGCCCCT ACGATCCGGC GGAGGAGTTC GAATCGGATG CCGGACGACG GGAGCGGTAT
GGGCGTGCGT GA
 
Protein sequence
MFEVAYPDRL LSEGEQVVAH KHPHFKMLIF PTLALVVTAV AGGYLAWQAT DFAAPWDTVV 
LITIAVVGGI LIVWLFLTPF VRWRTTHFVV TTDRVIVREG VIKRTGIDIP MGRIHSVRFE
HGLVDRIFGC GTLIIESASD EPLTFDDIPQ VERMHTYIYR QVNDNPYDDY GAPGVRDEPH
ARPYDPAEEF ESDAGRRERY GRA