Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_05910 |
Symbol | |
ID | 8385929 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | + |
Start bp | 604092 |
End bp | 604703 |
Gene Length | 612 bp |
Protein Length | 203 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 644974688 |
Product | predicted membrane protein |
Protein accession | YP_003132489 |
Protein GI | 257054657 |
COG category | [S] Function unknown |
COG ID | [COG3428] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.697555 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTTCGAGG TGGCGTATCC CGACCGTCTG CTCAGCGAGG GCGAGCAGGT CGTGGCACAC AAGCATCCAC ATTTCAAGAT GCTGATCTTC CCCACGCTCG CGCTCGTGGT GACGGCGGTG GCCGGGGGGT ATCTCGCCTG GCAGGCCACC GATTTCGCGG CTCCGTGGGA CACCGTGGTG TTGATCACCA TCGCCGTTGT GGGCGGCATC CTCATCGTCT GGTTGTTCTT GACGCCGTTC GTCCGGTGGC GCACCACGCA CTTCGTCGTC ACCACCGACC GCGTGATCGT CCGGGAGGGC GTGATCAAAC GCACCGGGAT CGACATCCCG ATGGGCCGCA TCCACAGCGT GCGGTTCGAA CACGGGCTCG TCGATCGCAT CTTCGGCTGC GGCACGCTCA TCATCGAGTC CGCGTCGGAC GAACCGTTGA CCTTCGACGA CATCCCGCAG GTCGAGAGGA TGCACACCTA CATCTACCGT CAGGTCAACG ACAACCCCTA CGACGACTAC GGTGCCCCCG GCGTCCGCGA CGAACCGCAC GCGCGCCCCT ACGATCCGGC GGAGGAGTTC GAATCGGATG CCGGACGACG GGAGCGGTAT GGGCGTGCGT GA
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Protein sequence | MFEVAYPDRL LSEGEQVVAH KHPHFKMLIF PTLALVVTAV AGGYLAWQAT DFAAPWDTVV LITIAVVGGI LIVWLFLTPF VRWRTTHFVV TTDRVIVREG VIKRTGIDIP MGRIHSVRFE HGLVDRIFGC GTLIIESASD EPLTFDDIPQ VERMHTYIYR QVNDNPYDDY GAPGVRDEPH ARPYDPAEEF ESDAGRRERY GRA
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