| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_05780 |
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| Symbol | |
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| ID | 8385916 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | - |
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| Start bp | 591167 |
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| End bp | 592114 |
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| Gene Length | 948 bp |
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| Protein Length | 315 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644974675 |
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| Product | MIP family channel protein |
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| Protein accession | YP_003132476 |
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| Protein GI | 257054644 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0580] Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) |
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| TIGRFAM ID | [TIGR00861] MIP family channel proteins |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGTGA AGGACACCCG TCACCGAACC AGCAGCTTGG CCAGACTCCG GCAGAACACC
GGTGGAGAGT TACTGGCCGA GTTCCTGGGG ACGGCGGTGC TCATCTTGTT GGGGTGCGGC
TCGGTCGCTG TCGCACTGGC CGGTCTACCG GGATCCGGCC GCCAGATAGA CGCCTTCGGA
CCGGGCAACT GGCTGATCAT CGTCTTCGGC TGGGGCCTGG CCGTCGTCTT CGGAGTGTAC
GTCGCGGGCG GGGTCAGCGG CGCACACATC AACCCGGCGG TCACCCTCGC CTTCGCTGTG
AGACGGAAGT TTTCCTGGGC GAAAGTGGTT CCCTACTGGA TCGCTCAGCT CTTGGGAGCG
TTCGCGGGGG CCGCGGTGGT CTACGCCGTG TACGCCGATG CGATCAACGC ATTCAACGCC
GCCGAGGGTT TCGCCGACAG GGCCGAATCG GTACCCAGCT TCTCGATCTT CGCCACGTTC
CCCGCTGAAT ACTTCGGTGG CGGGGTGTGG GGTCCCCTCG TCGACCAGAT CGTCGGCACG
GCGATCCTCG TCATGCTCAT CGCTGCACTG ATCGACAGCC GCAACATGTC CCCTCAGAAC
AACTTCGGGC CATGGGTGAT CGGTTTCGTC GTGACCGCCA TCGGACTGAG CTTCGGCACC
AACGCCGGAT ATGCGATCAA CCCGGCACGT GACTTCGGTC CCCGCCTGCT CGCGTACTTC
GCCGGTTGGG GTGAGGCGGC TTTGCCCGGT AACGGTGAAT GGTTCAGCAA CTACTGGTGG
ATCCCCATCC TTGGACCACT CGTCGGTGGT GTGGTCGGCA TCCTGATCTA CGACCTGTTC
ATCGGCCAGG TCCTGAAGGC CCGCGAGACG TTGGAAGGTG TGGAAGGCCC TCCCGCTGGA
CGGGTTCCCG AACCCACCGA CGCCACCGAG ACACGCAGGT CCGAGTAA
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| Protein sequence | MSVKDTRHRT SSLARLRQNT GGELLAEFLG TAVLILLGCG SVAVALAGLP GSGRQIDAFG
PGNWLIIVFG WGLAVVFGVY VAGGVSGAHI NPAVTLAFAV RRKFSWAKVV PYWIAQLLGA
FAGAAVVYAV YADAINAFNA AEGFADRAES VPSFSIFATF PAEYFGGGVW GPLVDQIVGT
AILVMLIAAL IDSRNMSPQN NFGPWVIGFV VTAIGLSFGT NAGYAINPAR DFGPRLLAYF
AGWGEAALPG NGEWFSNYWW IPILGPLVGG VVGILIYDLF IGQVLKARET LEGVEGPPAG
RVPEPTDATE TRRSE
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