Gene Svir_05730 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_05730 
Symbol 
ID8385911 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp585597 
End bp586490 
Gene Length894 bp 
Protein Length297 aa 
Translation table11 
GC content69% 
IMG OID644974670 
Producthypothetical protein 
Protein accessionYP_003132471 
Protein GI257054639 
COG category[S] Function unknown 
COG ID[COG2852] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGGCACG ACCGGGGGAT GCGTGGCCCC GTCACGCGAC GTGACGCTGC GGCCGCTTTG 
GGAGAACACG CGTTGAGAAC CGCTCTTCGC CACGGGGTGT TGACCCAACC GTGGCGGGGC
GTCGTGATGC ACACGGCCGA CCTACGGGAC CTTCGCGCTC GAGCGGCGGC GGCCGTCCTG
TTCGTCGGTG AACCCGTGGT GCTCTCCGGA CCGACGGCGT TGCGGTTGCA CGGCTGCGAC
GCGGTACCGG AGACCGGGCC GATCCACGTG ACGGTCCCGT ACTCACGGTC CGCCAGATCC
CGACCGGGGC TCGCCATGCA CCAGAGCCGG TTCAACTCCG CCGACGTGAT CGAGCTCGAC
GGGCTTCCCG TGTTCCCGCT CGAGCTCGCG ATCGCCGACC AGCTGTGCGG CCGTGATGCC
CGCCGCGCGT TCGCGGCGCT GGACCAGGCG TTGCGCATGC GTCCCGGTGA GGAAGGCGAA
TCGTTCCGTT CGGCCGTGCG GGCCCGCCTC ACCTCCCGCG CCGATCGACG TGGCGTACCG
AGGGCGCTCA TGCTCACCGA GCTGGCCACG GGCCGAGCGG ATTCACCGCC CGAAAGCTCG
CTTCTGCTGA CTGTGGTCGA AGCCGGATTC CCGGTACCGG AGCCGCAACA TCCGATACAC
ACGATCGACG GGCGGTTGCT GTACGTGCTC GATCTGGCCT GGGAACAGTG GCGGATCGCC
GTGGGATACG ACGGTTACGA GGCGCATGAG GATCGCGCCG CCCACGATGC CGAACGTGGC
CGTCGACTCG CCGGGCGAGG ATGGCTGGTG ATCAGGGCCA GGGCTGAGGA CTTACGTGAT
CCGTCGCGGG TTCTGCGGGA GTTGCGTGAG GCGTTCGCTC AACGATCCCG TTAG
 
Protein sequence
MWHDRGMRGP VTRRDAAAAL GEHALRTALR HGVLTQPWRG VVMHTADLRD LRARAAAAVL 
FVGEPVVLSG PTALRLHGCD AVPETGPIHV TVPYSRSARS RPGLAMHQSR FNSADVIELD
GLPVFPLELA IADQLCGRDA RRAFAALDQA LRMRPGEEGE SFRSAVRARL TSRADRRGVP
RALMLTELAT GRADSPPESS LLLTVVEAGF PVPEPQHPIH TIDGRLLYVL DLAWEQWRIA
VGYDGYEAHE DRAAHDAERG RRLAGRGWLV IRARAEDLRD PSRVLRELRE AFAQRSR