| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_05680 |
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| Symbol | |
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| ID | 8385906 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | + |
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| Start bp | 580319 |
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| End bp | 582499 |
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| Gene Length | 2181 bp |
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| Protein Length | 726 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644974665 |
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| Product | methylmalonyl-CoA mutase |
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| Protein accession | YP_003132466 |
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| Protein GI | 257054634 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1884] Methylmalonyl-CoA mutase, N-terminal domain/subunit |
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| TIGRFAM ID | [TIGR00640] methylmalonyl-CoA mutase C-terminal domain
[TIGR00641] methylmalonyl-CoA mutase N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCATCC CTGATTTCAG CGACATCGAG CTGGGGGCCG GTGCCGCGCC GAGCGGCGAC
AAGCAGGAAT GGCTGGAGGC GTTGCGCGCC AGCACCGGCA AGGACGTCGA CGCGCTCACG
TGGCAGACCC CGGAGGGCAT CAGCGTCAAA CCGCTCTACA CGGCGGAGGA CCTGACGGAC
CTGGACTTCC TGCGTACCTA TCCCGGCATC GCGCCGTACC TGCGGGGCCC GTACCCCACG
ATGTACACGA CACAGCCGTG GACCATCCGC CAGTACGCCG GGTTCTCCAC GGCCGAGGAG
TCCAACGCCT TCTACCGTCG CAACCTCGCC GCGGGTCAGA AGGGCCTGTC CGTGGCGTTC
GACCTCGCCA CCCACCGCGG CTACGACTCC GACCACCCGC GCGTGGCCGG TGACGTCGGC
ATGGCGGGGG TGGCCATCGA CTCGATCTAC GACATGCGGC AGCTGTTCGA CGGCATCCCG
CTCGACCGCA TGAGCGTGTC GATGACCATG AACGGCGCCG TGCTGCCCGT GCTGGCGCTG
TACGTGGTGG CGGCGGAGGA ACAGGGTGTG CGGCCCGAGC AGCTCGCGGG GACCATCCAA
AACGACATCC TCAAGGAGTT CATGGTCCGC AACACCTACA TCTACCCGCC GCAACCGTCG
ATGCGGATCA TCTCCGACAT CTTCGCGTTC ACGTCGCAGC GGATGCCGAA GTTCAACTCC
ATCTCGATCT CCGGCTACCA CATGCAGGAA GCCGGGGCCA CGGCCGATCT GGAGTTGGCG
TACACGCTGG CCGACGGCGT CGAGTACATC CGCGCCGGTC TGGACGCCGG ACTCGACATC
GACGCTTTCG CTCCGCGACT GTCGTTCTTC TGGGCCATCG GCATGAACTT CTTCATGGAG
GTCGCCAAAC TGCGGGCCGC ACGGCTGCTG TGGGCGAAGC TCGTGAAGCA GTTCGAACCG
CGCAACCCCA AGTCGCTGAG CCTGCGCACG CACTGCCAGA CCTCCGGATG GTCGCTCACG
GCCCAGGACG TCTACAACAA CGTCGTGCGC ACGTGCGTCG AGGCTATGGC GGCCACCCAG
GGCCACACGC AGTCGTTGCA CACCAACGCC CTCGACGAGG CCCTGGCGTT GCCGACCGAC
AGCAGTGCCC GGATCGCGCG CAACACGCAG TTGCTGCTCC AGCAGGAATC CGGCACCACG
CGCGTCATCG ACCCGTGGGG TGGCAGCGCG TACGTTGAAC GGCTCACCTA CGAACTCGCC
CGGCGGGCGT GGAGCCACAT CGAGGAGGTC GAGTCCGCGG GCGGCATGGC CAGGGCGATC
GACGCCGGTA TCCCCAAGCT CCGCATCGAG GAGGCCGCCG CACGTACGCA GGCCCGGATC
GACTCGGGCA GGCAGCCGGT GATCGGCGTG AACAAGTACC GCCTCGGTCC CGAGGACGAC
ACCGAACTCG ATGTCCTCAA GATCGACAAC GCGGGTGTGC GGGCCCAGCA GCTGGAGAAG
TTGCGCAGGC TGCGCGCCGA ACGTGACGAG GACGCCACCC AGGACGCGCT GCGCAGGCTC
ACCGCCGGCG CGGAGGGTGA CGGCAACCTC CTGGAGTTGG CCATCGACGC GGCCAGGGCC
AAGGCCACCG TCGGGGAGAT CTCGGAGGCG CTGGAGAAGG TCTGGGGCAG GCACTCCGGG
CAGATCCGTA CCATCTCCGG CGTGTACCGC GAGGAGGTCG GCAAGACCGC CAAGGTAGAG
ACCGCCCGGC AACGGGTCGA CGCGTTCGCC GAGGCTGAGG GGCGCAGGCC GCGCATCCTG
GTGGCCAAGA TGGGCCAGGA CGGTCACGAC CGTGGACAGA AGGTGGTCGC CACCGCGTTC
GCGGACCTCG GTTTCGACGT CGACGTCGGG CCGTTGTTCT CGACCCCCGC CGAGGTGGCG
CGCCAGGCGG TGGAGGCCGA CGTGCACATC GTGGGTGTGT CGTCGTTGGC GGCAGGACAC
CTCTCGCTCG TGCCTCAGCT GCGGGACGAG CTCGCCGCGT TGGGTCGTGA CGACATCATG
ATCGTGTGCG GTGGCGTCAT CCCGCCGCAG GACTACGACG AGCTGCGCGC GGCAGGGGCC
TCCGCCATCT TCGGGCCGGG CACCGTGATC GCCGACAGCG TCGTCACGTT GCTCGACGAG
CTCGAGGCAC GACACTCATA G
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| Protein sequence | MSIPDFSDIE LGAGAAPSGD KQEWLEALRA STGKDVDALT WQTPEGISVK PLYTAEDLTD
LDFLRTYPGI APYLRGPYPT MYTTQPWTIR QYAGFSTAEE SNAFYRRNLA AGQKGLSVAF
DLATHRGYDS DHPRVAGDVG MAGVAIDSIY DMRQLFDGIP LDRMSVSMTM NGAVLPVLAL
YVVAAEEQGV RPEQLAGTIQ NDILKEFMVR NTYIYPPQPS MRIISDIFAF TSQRMPKFNS
ISISGYHMQE AGATADLELA YTLADGVEYI RAGLDAGLDI DAFAPRLSFF WAIGMNFFME
VAKLRAARLL WAKLVKQFEP RNPKSLSLRT HCQTSGWSLT AQDVYNNVVR TCVEAMAATQ
GHTQSLHTNA LDEALALPTD SSARIARNTQ LLLQQESGTT RVIDPWGGSA YVERLTYELA
RRAWSHIEEV ESAGGMARAI DAGIPKLRIE EAAARTQARI DSGRQPVIGV NKYRLGPEDD
TELDVLKIDN AGVRAQQLEK LRRLRAERDE DATQDALRRL TAGAEGDGNL LELAIDAARA
KATVGEISEA LEKVWGRHSG QIRTISGVYR EEVGKTAKVE TARQRVDAFA EAEGRRPRIL
VAKMGQDGHD RGQKVVATAF ADLGFDVDVG PLFSTPAEVA RQAVEADVHI VGVSSLAAGH
LSLVPQLRDE LAALGRDDIM IVCGGVIPPQ DYDELRAAGA SAIFGPGTVI ADSVVTLLDE
LEARHS
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