Gene Svir_05100 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_05100 
Symbol 
ID8385848 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp506749 
End bp507546 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content65% 
IMG OID644974607 
Productexodeoxyribonuclease III 
Protein accessionYP_003132411 
Protein GI257054579 
COG category[L] Replication, recombination and repair 
COG ID[COG0708] Exonuclease III 
TIGRFAM ID[TIGR00195] exodeoxyribonuclease III
[TIGR00633] exodeoxyribonuclease III (xth) 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTCACCG TGTCGACCGT CAACGTCAAC GGCCTGAGGG CCGCCGCCAA GAAGGGGTTC 
AGCGAGTGGT TCGAGGCCAC ATCGGCTGAC GTCGTCGCGT GCCAGGAAGT GCGGGCCGAT
CCCGGTGTTC TGCCCGACGC CTTGCGGGAA CCGCCGGGTT GGCACACCGT TCATGCCGCG
TGCGCCACCA AGGGGCGTAA CGGCGTGTGC CTCTACAGCC GCATCGAACC CGAGTCAGTG
CGGGTCGGTT TCGGTGAGGC CGAGTTCGAG GACAGTGGCC GTTACGTCGA GATGTGGCTG
CCCAGGGTGG TCGTGGGCAG TCTTTATCTG CCCAGTGGCG AGGTCGGCAC GCCCCGGCAG
GAGGAGAAGG AACGGTTCAT GGACACCTTC CTGCCGTATC TGGCGACTTT GCGGGACAAG
GCGTCGTCGG AGGGCAAGGA GGTCCTTGTC GTCGGTGACT GGAACATCGC CCATGCCGAG
GTCGACCTGA AGAACTGGAA GGCCAACCGC AAGAATTCCG GCTTCCTGCC CGAGGAGCGC
GCGTGGCTTT CCCGCGTGTT CGACGAACTC GGCTACGTCG ACGTGCAGCG TCACCTCGAC
CCCGAGGGGC CCGGTCCGTA CACGTGGTGG TCGTACCGGG GCAGGGCCTT CGACAACGAC
GCCGGATGGC GGATCGACTA CCAGATCGCC ACTCCCGGTT TGGCGCAGCG GTGCACGTCG
ATGGTGGTGG AACGGGCCGA AAGTTATGAC AAGCGGTGGA GCGATCACGC GCCGGTGACG
GCGACGTACG AGATCTGA
 
Protein sequence
MLTVSTVNVN GLRAAAKKGF SEWFEATSAD VVACQEVRAD PGVLPDALRE PPGWHTVHAA 
CATKGRNGVC LYSRIEPESV RVGFGEAEFE DSGRYVEMWL PRVVVGSLYL PSGEVGTPRQ
EEKERFMDTF LPYLATLRDK ASSEGKEVLV VGDWNIAHAE VDLKNWKANR KNSGFLPEER
AWLSRVFDEL GYVDVQRHLD PEGPGPYTWW SYRGRAFDND AGWRIDYQIA TPGLAQRCTS
MVVERAESYD KRWSDHAPVT ATYEI