Gene Svir_04990 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_04990 
Symbol 
ID8385837 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp498131 
End bp499087 
Gene Length957 bp 
Protein Length318 aa 
Translation table11 
GC content70% 
IMG OID644974597 
Producthypothetical protein 
Protein accessionYP_003132401 
Protein GI257054569 
COG category[S] Function unknown 
COG ID[COG3238] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCAGGGC TCGTCATCGC CGTGATCGCG GGTCTGGGCA TGGCGATCCA GAGTCGGGTC 
AACGGTGAAC TGAGCACGCG CTTGGGTGAC GTCGTACTCG CCGCCGTGAT CTCGTTCGGC
ACCGGTTTGC TGCTGTTGCT GCTGCTGTTG GCGTGCTCGT CGCGGATGCG GTCCGGGCTC
AGTCATGTGG TACCGGCTCT GCGGGCCGGA CTCCTGCGAC CGTGGCACTT CCTCGGGGGC
CTCGCGGGCG CGACGTACGT CCTGGGGCAG GCGGGGACGG TGGCGCTGAT CGGGGTGGCC
CTGTTCACCG TCGGGGTCGT GGCGGGCCAG ACGGTGAGCG GTCTGGCCGT GGACAAGTTC
GGACTCGGAC CGGCGGGCCG CCGTGCCGTG ACGTGGCCCC GCACCCTCGG GGCGGTGCTC
ATGGTGGGGG CCGTCGGCGT CGCGGTGGGT GGCGATCTCG TCGACGCGGA ACTCGGACGG
GTGTGGGTAC TGGTGCTCCC GGTTCTCGCG GGCATGGGCA TGGCGGTGCA GCAGGCGTTC
AACGGGCGGA TCGGCGCGGT GGTGGACAGT CCGCTCACCG CCGCGTTGGT GAACTTCACG
GCGGGTACCA CGGCGCTGGT CGTCGCGTGG CTCGTGTCGC TGGTGGCGTT CGGCGCCACC
GCACCGACCG CGTTGCCCGA GGATCCGGTG CTGTACCTCG GCGGAGTCAT CGGGATCGTG
TTCATCACGG TGGCGGCGGT GCTCGTGTCG TGGACGGGGG TCCTGCTGTT CGGCCTGGCC
TCCGTGGCGG GGCAACTACT CGGTTCGGTG GTCGTCGATC ACGTCGTGCC CGCCACCGAA
GAAGGCGTGG GCACGTCGAC GCTGCTCGGC TGTGCGGTCG CTCTGGTGGC CGTGGTGGTC
GCGGCGATGG GCGGACGACG AGGAGGCGGT CGCGCTTTGG AAGAATCACC GTCGTGA
 
Protein sequence
MAGLVIAVIA GLGMAIQSRV NGELSTRLGD VVLAAVISFG TGLLLLLLLL ACSSRMRSGL 
SHVVPALRAG LLRPWHFLGG LAGATYVLGQ AGTVALIGVA LFTVGVVAGQ TVSGLAVDKF
GLGPAGRRAV TWPRTLGAVL MVGAVGVAVG GDLVDAELGR VWVLVLPVLA GMGMAVQQAF
NGRIGAVVDS PLTAALVNFT AGTTALVVAW LVSLVAFGAT APTALPEDPV LYLGGVIGIV
FITVAAVLVS WTGVLLFGLA SVAGQLLGSV VVDHVVPATE EGVGTSTLLG CAVALVAVVV
AAMGGRRGGG RALEESPS