| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_04710 |
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| Symbol | |
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| ID | 8385809 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | + |
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| Start bp | 462615 |
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| End bp | 463187 |
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| Gene Length | 573 bp |
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| Protein Length | 190 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644974569 |
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| Product | RNA polymerase sigma factor, sigma-70 family |
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| Protein accession | YP_003132373 |
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| Protein GI | 257054541 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 0.76285 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCAACG TGGGGGATGG ACTGGACGAG TCAGTCGCCG CCGCTGTCGA GGGGGATCCC
CAGGCAGTCG AGCGGCTGCT GGCCGCTATC CGTCCTCTTG TGGTGCGGTA CTGCCGCGCC
AGGGTTGGCA GGCAGGAACG TTCGTTCACG TCGGCGGACG ACGTGGCCCA GGAGGTGTGT
CTCGCGGTGC TCACGGCGTT GCCTTCGTAC CGTGATCAAG GCCGCCCCTT CCTGGCTTTC
GTCTACGGAA TCGCCCAGCA CAAGGTCGCC GACGCGCATC GGGCGGCGTC CCGCAACCGC
GCGGAGCCGG TCGCCGATAT ACCGGACGAG ATCGAGGGCG ATATCGGCCC TGAGCAGCGT
GCCCTGCGGG GCGAGTTGAA CGAGCGAATG TCGCAGTTGT TGCAGGTGCT GCCGGAAAAA
CAACGCGAGA TCGTGGTGTT GCGGGTGGTT GTCGGTCTGT CTGCGGAGGA GACCGCCGAA
GCTGTCGGAT CGACGCCCGG GGCGGTCAGG GTCGCCCAGC ATCGCGCCCT CGCGCGGCTG
CGCAAAGCGC TGGCCGCTGA GGAGGTGGTC TGA
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| Protein sequence | MTNVGDGLDE SVAAAVEGDP QAVERLLAAI RPLVVRYCRA RVGRQERSFT SADDVAQEVC
LAVLTALPSY RDQGRPFLAF VYGIAQHKVA DAHRAASRNR AEPVADIPDE IEGDIGPEQR
ALRGELNERM SQLLQVLPEK QREIVVLRVV VGLSAEETAE AVGSTPGAVR VAQHRALARL
RKALAAEEVV
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