Gene Svir_04660 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_04660 
Symbol 
ID8385804 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp457872 
End bp458165 
Gene Length294 bp 
Protein Length97 aa 
Translation table11 
GC content63% 
IMG OID644974564 
ProductCo-chaperonin GroES 
Protein accessionYP_003132368 
Protein GI257054536 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0234] Co-chaperonin GroES (HSP10) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.00798314 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCGTGA ACATCAAGCC GCTCGAGGAC AGGATTGTTG TCCAGACGAG CGAGGCCGAG 
GAGACGACGG CTTCCGGCCT CGTCATCCCC GACACTGCTA AGGAGAAGCC CCAGGAGGGC
AAGGTTCTGG CCGTGGGCCC GGGCCGCATC GACGACAAGG GCAACCGCAT CCCCCTGGAT
GTCAAGGTGG GCGACGTCGT TATCTACTCC AAGTACGGCG GCACCGAGGT CAAGTACAAC
GGTGAGGAGT ACTTGATCCT GTCCGCCCGC GACGTGCTGG CTGTCGTCAA CTGA
 
Protein sequence
MSVNIKPLED RIVVQTSEAE ETTASGLVIP DTAKEKPQEG KVLAVGPGRI DDKGNRIPLD 
VKVGDVVIYS KYGGTEVKYN GEEYLILSAR DVLAVVN