| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_04560 |
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| Symbol | |
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| ID | 8385794 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | + |
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| Start bp | 446460 |
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| End bp | 448322 |
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| Gene Length | 1863 bp |
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| Protein Length | 620 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644974554 |
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| Product | glucosamine--fructose-6-phosphate aminotransferase |
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| Protein accession | YP_003132358 |
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| Protein GI | 257054526 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0449] Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains |
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| TIGRFAM ID | [TIGR01135] glucosamine--fructose-6-phosphate aminotransferase (isomerizing) |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.0716921 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTGCGGAA TCGTGGGATA CGTCGGGCAT CGGCAGGCAC TCGACGTGGT ACTCGGCGGG
CTTCGTCGCA TGGAGTACCG CGGCTACGAC TCAGCGGGAG TCGCGGTGCT CGCAGACGAC
AAGAAGCTGG TCGTCGAGCG CAAAGCGGGC CGCATAGCCA ACCTCGAAGC CGCCCTCGAC
GCCACCGGCC GCGACACGTT CACCGGCACC GCGGGCATGG GCCACACCCG CTGGGCCACG
CACGGCGCAC CGGTGGACCG CAACTCCCAC CCCCACCGCG ACTCCACAGG CCGGGTCGCG
GTGGTGCACA ACGGCATCAT CGAGAACTTC GCCGCGCTGC GCACCGAGCT GGAGGACTCC
GGCATCGAGC TGAGCAGCGA CACCGACACC GAGGTCACCG CACACCTCAT CGCCCGCGCG
TACGACCACG GCGACACGGC CGGTGACCTC CCGGCCAGCG TGCGCGCGGT GTGCCGCAGG
TTGGAGGGCG CGTTCACGCT GGTCGTCACC CACGCCGACC GGCCCGACCT CATCGTCGCG
GCACGTCGTT CGTCACCACT CGTGGTGGGT GTGGGCAAGG ATGAGGCCTT CGTCGCCTCC
GACGTGGCCG CCTTCATCGA ACACACTCGC GAGGCCGTGG AGCTCGGCCA GGACCAGCTC
GTGGTGATCA GCCGCGACGG CTATGAGATC ACCGACTTCC ACGGTGTCCC CGCGGAGGGC
AAGCCCTTCA CGGTCGACTG GGACCTGTCG GCCGCGGAGA AGGGCGGCCA CGAGTACTTC
ATGTTCAAGG AGATCGAGGA GCAGCCCGAC GCGCTCGCCA ACACGTTGCG CGGACACTTC
GAGTCCGGGC GCATCGTGCT CGACGAGCAA CGTCTGTCCG ACCAGGACCT GCGGGACGTC
GACAAGGTGT TCGTCGTGGC CTGCGGTTCC GCTTACCACT CCGGTCTGGT CGCGAAGTAC
GCCATCGAGC ACTGGACCCG CCTCCCGGTG GAGGTCGAGC TGGCCAGTGA GTTCCGCTAC
CGCGACCCGG TGCTCGACCG GGACACGCTG GTGGTCGCCG TGTCGCAGTC GGGTGAGACG
GCCGACACGT TGGAGGCCGT GCGGCACGCC AGGGAACAGA AGGCCAGGGT GCTCGCGGTG
TGCAACACCA ACGGCGCGCA GATCCCCCGG GAGTCGGACG CCGTGCTGTA CACCCACGCC
GGGCCCGAGA TCGGGGTCGC GTCCACGAAG GCGTTCCTCG CGCAGGTGGC GGCGAACTAC
CTCGTGGGGT TGGCCCTCGC CCAGGCACGC GGCACGAAGT ACCCCGACGA GGTGGCGCGC
GAGTTCGCCG AGCTCGAAGC GATGCCGTCG GCCGTCAAGT CCGTGCTGGC CACAGTGGAC
CAGGTCCGTG ACCTGGGCAG GCGGATGGCC GATGCGCGCG CGGTGCTGTT CCTCGGCCGC
CACGTCGGGT TCCCGGTGGC GCTGGAAGGC GCGCTGAAAC TGAAGGAACT CGCCTACATG
CACGCCGAGG GGTTCGCGGC GGGCGAGTTG AAGCACGGCC CGATCGCGTT GATCGAGGAA
GGGCTTCCCG TGGTGGTGGT CATGCCCTCA CCGAAGGGGC GTGCCGTGCT GCACTCCAAG
ATGGTGTCCA ACATCAGCGA GATCCAGGCT CGTGGCGCCC GCACCATCGT GATCGCCGAG
GAAGGTGATG AGCGGGTGCG CCCGTTCGCG GACGAGCTCG TGGAGATCCC GGCGGTGCCG
ACGTTGTTGC AGCCGCTGGT GTCCACGGTG CCGCTGCAGG TGTTGGCCGC CGAGATCGCT
CGCACCCGCG GCTATGACGT CGACAAACCG AGGAATCTGG CCAAGTCGGT GACGGTGGAG
TAG
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| Protein sequence | MCGIVGYVGH RQALDVVLGG LRRMEYRGYD SAGVAVLADD KKLVVERKAG RIANLEAALD
ATGRDTFTGT AGMGHTRWAT HGAPVDRNSH PHRDSTGRVA VVHNGIIENF AALRTELEDS
GIELSSDTDT EVTAHLIARA YDHGDTAGDL PASVRAVCRR LEGAFTLVVT HADRPDLIVA
ARRSSPLVVG VGKDEAFVAS DVAAFIEHTR EAVELGQDQL VVISRDGYEI TDFHGVPAEG
KPFTVDWDLS AAEKGGHEYF MFKEIEEQPD ALANTLRGHF ESGRIVLDEQ RLSDQDLRDV
DKVFVVACGS AYHSGLVAKY AIEHWTRLPV EVELASEFRY RDPVLDRDTL VVAVSQSGET
ADTLEAVRHA REQKARVLAV CNTNGAQIPR ESDAVLYTHA GPEIGVASTK AFLAQVAANY
LVGLALAQAR GTKYPDEVAR EFAELEAMPS AVKSVLATVD QVRDLGRRMA DARAVLFLGR
HVGFPVALEG ALKLKELAYM HAEGFAAGEL KHGPIALIEE GLPVVVVMPS PKGRAVLHSK
MVSNISEIQA RGARTIVIAE EGDERVRPFA DELVEIPAVP TLLQPLVSTV PLQVLAAEIA
RTRGYDVDKP RNLAKSVTVE
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