Gene Svir_04450 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_04450 
Symbol 
ID8385783 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp434433 
End bp434921 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content66% 
IMG OID644974544 
ProductSSU ribosomal protein S9P 
Protein accessionYP_003132348 
Protein GI257054516 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0103] Ribosomal protein S9 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.271227 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGTGAGG AACAGTCTGT GACCAGCACC GAGACCGAGG CCGCTTACGA CGCGGTCGTG 
ACCAGCGAGA CGCCCGCCGC CCCGGCGCCG TCTCGGGCTG CCGGGGGTAC CGCGCAGACG
GTGGGCCGTC GTAAGGAGGC GGTCGTCCGG GTGCGCATGG TTCCCGGCAC CGGCGAGTTC
AGGTTGAACG GCAAGAGCCT CGAGCAGTAC TTCCCGAACA AGGTTCACCA GCAGCTGATC
CGTGAGCCGC TGGTCACCGT CGAGAAGGCC GAGTCGTTCG ACGTCCACGC CCGCCTGCAC
GGCGGTGGTA TCTCGGGTCA AGCAGGTGCG CTGCGGCTTG CGATCGCACG TGCATTGGCC
GAGATCGACA GCGATGACCG TCCTGCGCTG AAGAAGGCAG GCTTCCTCAC GCGTGACGCT
CGCGCGACCG AGCGTAAGAA GTACGGTCTG AAGAAGGCCC GTAAGGCCCC GCAGTACAGC
AAGCGCTGA
 
Protein sequence
MSEEQSVTST ETEAAYDAVV TSETPAAPAP SRAAGGTAQT VGRRKEAVVR VRMVPGTGEF 
RLNGKSLEQY FPNKVHQQLI REPLVTVEKA ESFDVHARLH GGGISGQAGA LRLAIARALA
EIDSDDRPAL KKAGFLTRDA RATERKKYGL KKARKAPQYS KR