Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_04180 |
Symbol | secY |
ID | 8385756 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | + |
Start bp | 408482 |
End bp | 409789 |
Gene Length | 1308 bp |
Protein Length | 435 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 644974518 |
Product | preprotein translocase subunit SecY |
Protein accession | YP_003132322 |
Protein GI | 257054490 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0201] Preprotein translocase subunit SecY |
TIGRFAM ID | [TIGR00967] preprotein translocase, SecY subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.132635 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCTCAGCG CCTTCCGCTC GGCTCTCGCG ACGCCGGACC TGCGCAAGAA GATCCTGTTC ACGCTGATGA TCGTGGCCAT CTACCGGATC GGTGCGGTCA CTCCAGCGCC CGGGGTTTCG TACCCGAACG TTCAGGCATG CCAGGCGCAG GTCGAGGATC AGAACATCTT CTCGCTGCTG AACCTATTCA GCGGTGGGGC GCTTTTGCAG CTGTCGGTCT TCGCCACCGG CATCATGCCT TACATCACGG CGAGCATCAT CGTTCAGCTG CTCACGGTGG TGATCCCCCG TTTCGAGGAG CTCAAGCGGG AAGGCCAGGC AGGCCAGGGC AAGCTCACGC AGTACACGCG GTACCTCACG ATTGCTCTGG CGGTCCTCCA GGCGACCGGT GTTGTGGCGC TTGCTGACCG CGGTCAGCTG TTCGCCAATT GTGACCAGCC CGTGTTGCCT GACAACAGCG TGTACTCGCT GACGCTGACG GTGCTGACGA TGACCGCGGG CACGGCCGTG ATGATGTGGC TGGGCGAGCT CATCACCGAG CGCGGCGTCG GCAACGGTAT GTCGCTGCTG ATCTTCCTGA ACATCGCCGC GCAGATCCCC ACCGAGGGCG CCAACATCCT GAGCAGCCAG GGTGGTCTGA CGTTCTTCTT CATCTGCCTG CTGGCGTTGG CGATCATCGC GAGCGTCATC TTCGTGGAGC AGGGGCAGCG GCGGATCCCC GTCCAGTACG CGAAGCGGAT GATCGGCCGT CGTATGTACG GCGGCACGTC CACTTATCTG CCGATCAAGG TGAACCAGGC CGGTGTCATC CCGGTCATCT TCGCGTCGTC GTTGTTGTAC CTGCCTGACC TCATCGGGCA GCTCGTCGGC GACCCGAACC AGGCGTCGGG TTGGCAACGG TTCCTGCAGA ACTACGTGTC TGATCAATCG CACTGGGTGC ACATCACCCT GTACTTCGCG ATGATCATGT TCTTCACGTA CTTCTACATC ACCATCACGT TCAACGTGGA CGACCGCGCG GAGGAGATGA AGAAGTTCGG CGGCTTCATC CCCGGCATCC GTCCTGGTCG TCCCACTGCC GAATACCTTG GTTTCGTGCT CAACAGGATC ACCCTGCCGG GCTCGATCTA CCTCGGTATC GTCGCGATCC TGCCTAACTT CTTCCTGTCG GTGACCGGCG AGGGGAACAA CCAGAACTTC CCGTTCGGCG GAACAGCTGT GTTGATCATG GTCGGTGTCG GGCTTGACAC CGTGAAACAG ATCGAGAGCC AGCTCATGCA GCGTAACTAC GAAGGGTTCC TCCGATGA
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Protein sequence | MLSAFRSALA TPDLRKKILF TLMIVAIYRI GAVTPAPGVS YPNVQACQAQ VEDQNIFSLL NLFSGGALLQ LSVFATGIMP YITASIIVQL LTVVIPRFEE LKREGQAGQG KLTQYTRYLT IALAVLQATG VVALADRGQL FANCDQPVLP DNSVYSLTLT VLTMTAGTAV MMWLGELITE RGVGNGMSLL IFLNIAAQIP TEGANILSSQ GGLTFFFICL LALAIIASVI FVEQGQRRIP VQYAKRMIGR RMYGGTSTYL PIKVNQAGVI PVIFASSLLY LPDLIGQLVG DPNQASGWQR FLQNYVSDQS HWVHITLYFA MIMFFTYFYI TITFNVDDRA EEMKKFGGFI PGIRPGRPTA EYLGFVLNRI TLPGSIYLGI VAILPNFFLS VTGEGNNQNF PFGGTAVLIM VGVGLDTVKQ IESQLMQRNY EGFLR
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