Gene Svir_04120 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_04120 
Symbol 
ID8385750 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp405458 
End bp405856 
Gene Length399 bp 
Protein Length132 aa 
Translation table11 
GC content63% 
IMG OID644974512 
ProductSSU ribosomal protein S8P 
Protein accessionYP_003132316 
Protein GI257054484 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0096] Ribosomal protein S8 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGATGA CCGACCCGAT CGCAGACTTC CTGACACGTC TGCGTAATGC GAACTCGGCG 
TACCACGACA CCGTTGTACT GCCGCACTCG AAGATCAAGG CGAACATCGC CGAGATCCTC
AAGCGCGAGG GCTACATCGC CGACTACCGC GTCGAACCGG GCGAGAAGCA CAAGAACCTG
GTTGTGGAGC TGAAGTACGG CCCCAACCGG GAGCGCAGCA TCGCCGGCCT CCGGCGGGTG
TCGAAGCCCG GTCTGCGTGT GTACGCGAAA TCGACCAACC TGCCCAGTGT TCTGGGTGGC
CTCGGCGTGG CGATCATCTC CACGTCGTCC GGTCTGCAGA CCGACAGGCA GTGCAAGCGC
AATGGCGTGG GCGGCGAAGT GCTCGCCTAC GTGTGGTGA
 
Protein sequence
MTMTDPIADF LTRLRNANSA YHDTVVLPHS KIKANIAEIL KREGYIADYR VEPGEKHKNL 
VVELKYGPNR ERSIAGLRRV SKPGLRVYAK STNLPSVLGG LGVAIISTSS GLQTDRQCKR
NGVGGEVLAY VW