Gene Svir_04020 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_04020 
Symbol 
ID8385740 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp401292 
End bp401573 
Gene Length282 bp 
Protein Length93 aa 
Translation table11 
GC content62% 
IMG OID644974502 
ProductSSU ribosomal protein S19P 
Protein accessionYP_003132306 
Protein GI257054474 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0185] Ribosomal protein S19 
TIGRFAM ID[TIGR01050] ribosomal protein S19, bacterial/organelle 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.904114 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCACGTA GCCTGAAGAA AGGCCCGTTC GTGGACGACC ACCTGCTCAA GAAGGTGGAC 
GCGCTCAACG AGTCGGGCAA GAAGACAGTC ATCAAGACTT GGTCCCGCCG GTCCACGATC
ATCCCGGACA TGCTCGGCCA CACCATCGCG GTGCACGACG GTCGCAAGCA TGTGCCGGTG
TTCATCACCG AGGCGATGGT CGGACACAAG TTGGGTGAGT TCGCTCCGAC GCGGACCTTC
AAGGGCCACG TCAAGGAAGA CCGTAAGTCG CGCCGCCGCT GA
 
Protein sequence
MPRSLKKGPF VDDHLLKKVD ALNESGKKTV IKTWSRRSTI IPDMLGHTIA VHDGRKHVPV 
FITEAMVGHK LGEFAPTRTF KGHVKEDRKS RRR