Gene Svir_04000 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_04000 
SymbolrplW 
ID8385738 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp400114 
End bp400425 
Gene Length312 bp 
Protein Length103 aa 
Translation table11 
GC content62% 
IMG OID644974500 
Product50S ribosomal protein L23 
Protein accessionYP_003132304 
Protein GI257054472 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0089] Ribosomal protein L23 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCTCCG TGGCGATCCC TGACCCGCGC GACGTCCTGA TCGCGCCGGT GATCTCCGAG 
AAGTCCTACG GGCTGCTCGA CGACCACAAG TACACGTTCC TGGTTCGCCC TGACGCCAAC
AAGACCGAGA TCAAGATCGC GGTCGAGAAG ATCTTCGGCG TGAAGGTGAT CAGTGTCAAC
ACGCTGAACC GTCCGGGTAA GCGGAAGCGC ACCCGGCATG GTTTCGGCAA GCGCAAGGAC
ACCAAGCGCG CCATCGTGAC GCTCTCGGCC GAGAGCAAGC CGATCGAGAT CTTCGGCGGA
CCAGCCGCGT AA
 
Protein sequence
MSSVAIPDPR DVLIAPVISE KSYGLLDDHK YTFLVRPDAN KTEIKIAVEK IFGVKVISVN 
TLNRPGKRKR TRHGFGKRKD TKRAIVTLSA ESKPIEIFGG PAA