| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_03970 |
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| Symbol | rpsJ |
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| ID | 8385735 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | + |
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| Start bp | 398442 |
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| End bp | 398747 |
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| Gene Length | 306 bp |
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| Protein Length | 101 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 644974497 |
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| Product | 30S ribosomal protein S10 |
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| Protein accession | YP_003132301 |
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| Protein GI | 257054469 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0051] Ribosomal protein S10 |
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| TIGRFAM ID | [TIGR01049] ribosomal protein S10, bacterial/organelle |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.914635 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCGGGAC AGAAGATCCG CATCAGGCTC AAGGCCTACG ACCATGAGGC GATCGACGCC
AGCGCGCGCA AGATCGTCGA GACGGTGACG CGCACCGGTG CCTCGGTCGT CGGACCTGTG
CCGCTGCCCA CCGAGAAGAA CGTTTACTGC GTAATCCGTT CGCCGCACAA GTACAAGGAC
TCGCGCGAGC ACTTCGAGAT GCGCACGCAC AAGCGTCTGA TCGACATCCT CGACCCGACG
CCGAAGACGG TGGACGCGCT CATGCGCATC GACCTTCCGG CGAGCGTCGA CGTCAACATC
CAGTAA
|
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| Protein sequence | MAGQKIRIRL KAYDHEAIDA SARKIVETVT RTGASVVGPV PLPTEKNVYC VIRSPHKYKD
SREHFEMRTH KRLIDILDPT PKTVDALMRI DLPASVDVNI Q
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