| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_03940 |
|---|
| Symbol | |
|---|
| ID | 8385732 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharomonospora viridis DSM 43017 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013159 |
|---|
| Strand | + |
|---|
| Start bp | 393883 |
|---|
| End bp | 394353 |
|---|
| Gene Length | 471 bp |
|---|
| Protein Length | 156 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 644974494 |
|---|
| Product | 30S ribosomal protein S7 |
|---|
| Protein accession | YP_003132298 |
|---|
| Protein GI | 257054466 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0049] Ribosomal protein S7 |
|---|
| TIGRFAM ID | [TIGR01029] ribosomal protein S7, bacterial/organelle |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 43 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCCGCA AGGGTCCGGC CCCGAAGCGG CCATTGACCG CTGATCCGGT TTACCAATCT
CCGCTTGTCA CCCAGTTGGT GAACAAGGTG CTGAAGGACG GTAAGCGTTC GCTGGCCGAG
CGCATCGTCT ACGGCGCTCT GGAGGGTGCG CGTGAGAAGA CCGGTACCGA CCCGGTCGTC
ACTCTGAAGC GCGCGCTCGA CAACGTACGG CCTACTCTCG AGGTGAAGAG CCGGCGTGTC
GGTGGTGCAA CCTATCAGGT GCCGATCGAG GTCAAGCCCG GTCGCTCGAC CACCCTTGCG
CTGCGTTGGA TCGTCACTTA CGCGCGGCAG CGGCGCGAGA AGACGATGAT CGAGCGTCTG
CAGAACGAGC TGCTCGATGC GAGCAACGGC CTCGGGGCCA GCGTGAAGCG CCGCGAGGAC
GTTCACAAGA TGGCCGAATC CAACAAGGCT TTCGCTCACT ACCGTTGGTG A
|
|---|
| Protein sequence | MPRKGPAPKR PLTADPVYQS PLVTQLVNKV LKDGKRSLAE RIVYGALEGA REKTGTDPVV
TLKRALDNVR PTLEVKSRRV GGATYQVPIE VKPGRSTTLA LRWIVTYARQ RREKTMIERL
QNELLDASNG LGASVKRRED VHKMAESNKA FAHYRW
|
|---|
| |