| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_03730 |
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| Symbol | |
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| ID | 8385711 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | + |
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| Start bp | 368305 |
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| End bp | 369336 |
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| Gene Length | 1032 bp |
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| Protein Length | 343 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644974473 |
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| Product | virulence factor Mce family protein |
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| Protein accession | YP_003132277 |
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| Protein GI | 257054445 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG1463] ABC-type transport system involved in resistance to organic solvents, periplasmic component |
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| TIGRFAM ID | [TIGR00996] virulence factor Mce family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.918695 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGGGGGC TGCTCGCGCC GCTGACGAAG CTCACCGTGT TCGTGGTCGT CACCGTGGTG
TTCACCACGA TCCTCGGGTT GAGCATCGCC AATGTGAACC TGGGGGGAAC CCACACCTAC
ACGGCCCGCT TCACCGACGC CACCTCGGTC CTGCCGGGCG ACGACGTGCG TATCGCCGGC
GTGATGGTGG GCAAGGTGTC CGACGTCCGG ATCGTGGACC GCAGGATCGC GGAGGTCGAG
TTCGAACTCG ACCGCAACCG CACGCTGCCC GACAACACCG TCGCCGCGAT CAAATTCCGT
AACCTCATCG GCCAGCGCTA TCTGTCGTTG GAGCGCGGCG AGGGCGAACC GCAGGGAGTA
CTCGAGCCGG GCGACACCAT CCCGTTGGAA CGCACCCGGC CCGCCGTCGA CCTGACCGAA
CTGTTCAACG GGTTCAAGCC GTTGTTCCAG GCGTTGTCGC CCGAGGACGT GAACACGCTG
TCGTACCAGA TCATCCAGGT ACTCCAGGGC GAGGGCGGCA CCGTGGAGAG CTTGCTCGCC
CACACGGCGT CGCTGACCAC CACGCTGGCC GAGAAGGACC AGGTCATCGG AGAGGTGATC
GACAACCTGA ACTCGGTGTT GCACACCCTC AACGAACGCA CACCGCAGCT GTCGCAGCTC
ATCAGCCGAC TCCAGCGGTT CGTGTCCGGC CTCGCCAGCG ACCGTGAACC CATCGGCGAG
GCCATCTCCT CCATCGGAGA CCTCGCCGAC ACGACCGCGG GCCTGTTGGA GGAGGCGCGC
GGGCCGCTGC GTGAGGACAT CGAGGCCCTC GGCGACCTGG CCGGCAACCT CAACGACCAC
GAGGCCGTGG TCGAGGAGTT CATCCAGTAT CTGCCGGAGA AGACCAACCG GTTGGCGTCC
GCGGCGGACT ACGGCTCGTG GCTGAACTTC TTCCTGTGCG AAGCGAAGGG CAACATCAGC
ATCACAGGTC TCGGGGACGC ACCCCTCAGC CTGCCGTTGC TCCCCGCGAA TCGAGAGCGG
TGCCTGTCAT GA
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| Protein sequence | MRGLLAPLTK LTVFVVVTVV FTTILGLSIA NVNLGGTHTY TARFTDATSV LPGDDVRIAG
VMVGKVSDVR IVDRRIAEVE FELDRNRTLP DNTVAAIKFR NLIGQRYLSL ERGEGEPQGV
LEPGDTIPLE RTRPAVDLTE LFNGFKPLFQ ALSPEDVNTL SYQIIQVLQG EGGTVESLLA
HTASLTTTLA EKDQVIGEVI DNLNSVLHTL NERTPQLSQL ISRLQRFVSG LASDREPIGE
AISSIGDLAD TTAGLLEEAR GPLREDIEAL GDLAGNLNDH EAVVEEFIQY LPEKTNRLAS
AADYGSWLNF FLCEAKGNIS ITGLGDAPLS LPLLPANRER CLS
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