Gene Svir_03630 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_03630 
Symbol 
ID8385701 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp359411 
End bp360214 
Gene Length804 bp 
Protein Length267 aa 
Translation table11 
GC content66% 
IMG OID644974463 
Producttranscription antitermination protein nusG 
Protein accessionYP_003132267 
Protein GI257054435 
COG category[K] Transcription 
COG ID[COG0250] Transcription antiterminator 
TIGRFAM ID[TIGR00922] transcription termination/antitermination factor NusG 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCTCCG AGAACGGCTC AGGAGCCGGT CAGGACATGA CTGGCCTCTC CGAAGAGCAG 
GCGCTCGCGG CCACTGGTGA CGCGGACTCG GACGTCGCCG AGGCCGCTGC CGCGCCGGAA
CAGGCCGCCG AGGCTGCGGA GTCTCCGGAG GCCGACAGCG CTGCTGCTGA CGAGCAGGCG
GACGAAGACG AGGACCCGGT CGCCAAGCTT CGTGCGGAGC TGGAATCACT GCCTGGCGAC
TGGTACGTCG TGCACTCCTA CGCCGGTTAC GAGAACAGGG TCAAAAGCAA CATCGAGACC
CGCCGGCAGA CGCTCGACGT CGAGGACTAC ATCTTCCAGG TCGAGGTGCC CACCGAAGAG
GTCACCGAGA TCAAGAACGG TCAGCGTAAG ATCGTGCAAC GGAAGGTGTT GCCCGGCTAC
ATCCTTGTCC GGATGGAGAT GAACGACGCG TCGTGGAGCG CGGTTCGGAA CACGCCGGGC
GTGACCGGAT TCGTCGGCGC TACCTCGCGT CCTTCGCCCT TGAGCCTCGA TGAGGTCGTG
AAGTTCCTCG CGCCCAAGGT CGAGAAGGCC GCCCCGGCCA AGGCCAAGGG CGAGCCCGCC
GCCGAGGAGC AGGTGGCTGC GGGCCCGGTG GAAGTGGACT TCGAGGTCGG CGAGTCCGTC
ACGGTCATGG ACGGCCCGTT CGCCACGCTG CCCGCCACGA TCAGCGAGGT GAACGTGGAC
GCGCAGAAAC TGAAGGTTCT GGTGTCGATC TTCGGCCGGG AGACTCCGGT CGAGTTGTCG
TTCAACCAGG TCTCCAAGAT CTGA
 
Protein sequence
MTSENGSGAG QDMTGLSEEQ ALAATGDADS DVAEAAAAPE QAAEAAESPE ADSAAADEQA 
DEDEDPVAKL RAELESLPGD WYVVHSYAGY ENRVKSNIET RRQTLDVEDY IFQVEVPTEE
VTEIKNGQRK IVQRKVLPGY ILVRMEMNDA SWSAVRNTPG VTGFVGATSR PSPLSLDEVV
KFLAPKVEKA APAKAKGEPA AEEQVAAGPV EVDFEVGESV TVMDGPFATL PATISEVNVD
AQKLKVLVSI FGRETPVELS FNQVSKI