Gene Svir_03590 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_03590 
Symbol 
ID8385697 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp356720 
End bp357070 
Gene Length351 bp 
Protein Length116 aa 
Translation table11 
GC content67% 
IMG OID644974459 
Producttranscriptional regulator, GntR family 
Protein accessionYP_003132264 
Protein GI257054432 
COG category[K] Transcription 
COG ID[COG1725] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.325087 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGGTTC GCATCGACCC GTCGTCCACG GTGCCCCTGT ACGAACAGGT CGCCGCTTCG 
ATCCGCGGTG AACTCGCACA CCAGCGGTTG GGCCCGGGCG ACCACCTTCC GGCCGCACGT
GAACTGGCGG AGAGCCTGCG GATCAACGTG CATACCGTCC TGCGGGCCTA CGCCAAGCTC
CGCGACGAAG GGCTCATCGA ACTTCGTCGT AGGCGAGGTG CCGTGGTCAC CGGGCATGCC
AGCGACCACG CACGACTGGC CGCGCTGGTG GACGACCTGA TCGCCGAGGC ACGCCGGGTG
GGTGTCGGCC CCGACGAACT GGTCACGATC GTGAGAGGGA AGTACCAGTG A
 
Protein sequence
MLVRIDPSST VPLYEQVAAS IRGELAHQRL GPGDHLPAAR ELAESLRINV HTVLRAYAKL 
RDEGLIELRR RRGAVVTGHA SDHARLAALV DDLIAEARRV GVGPDELVTI VRGKYQ