Gene Svir_03490 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_03490 
Symbol 
ID8385687 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp347619 
End bp348269 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content65% 
IMG OID644974449 
Productuncharacterized membrane-associated protein 
Protein accessionYP_003132256 
Protein GI257054424 
COG category[S] Function unknown 
COG ID[COG0586] Uncharacterized membrane-associated protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAGTC TCGTAGCTCA GTCCGACACC GAGTCGCTCG ACGGGCTCGC CGGGTGGACG 
GTAGATCTGA TGGACACGCT CGGTGGGCCG GGTGCGGCTG TGGCTGTGGG GCTCGACAAC
CTGTTCCCGC CCATCCCGAG TGAGTTGATC CTGCCGCTTG CGGGGTTCAC CGCCGCCCAG
GGCCGGTTCA GCCTCGTGGA GGCGCTGCTG TGGACCACGG CGGGTTCGGT GATCGGCGCG
ATCATCGTGT ACCTGGTCGG TTACATCTTC GGTCGGGAGC GCACGCGCAA GTTCATCACG
ATGCTGCCGC TGGTGAAGGA GTCCGACTTC GACCACGCGG AACGGTGGTT CGCCAAGCAC
GGCACCAAGG CGGTGTTCTT CGGCCGCATG GTCCCGCTCG TGCGGAGCTT CATCTCGGTT
CCCGCGGGGA TCGAGCGGAT GTCGTTCTGG GTCTTCCTGG CGCTCACCAC GTTCGGCAGC
CTGTTGTGGA ACACCATCTT CGTCGTCTCG GGCTACTTCC TGGGCGCCAA CTGGCACGTC
GTCGACGAGT ACGCGGGGAT CTTCCAGTAC GTCGTCATCG CCGCCATCGC GATCCTTCTC
GTGGTGTTCG TGGTGAAGCG GCTGCGCGAG CGTCGTAACG CCGACGTCTG A
 
Protein sequence
MNSLVAQSDT ESLDGLAGWT VDLMDTLGGP GAAVAVGLDN LFPPIPSELI LPLAGFTAAQ 
GRFSLVEALL WTTAGSVIGA IIVYLVGYIF GRERTRKFIT MLPLVKESDF DHAERWFAKH
GTKAVFFGRM VPLVRSFISV PAGIERMSFW VFLALTTFGS LLWNTIFVVS GYFLGANWHV
VDEYAGIFQY VVIAAIAILL VVFVVKRLRE RRNADV