Gene Svir_03170 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_03170 
Symbol 
ID8385655 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp312568 
End bp313116 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content64% 
IMG OID644974417 
ProductNADH dehydrogenase subunit B 
Protein accessionYP_003132225 
Protein GI257054393 
COG category[C] Energy production and conversion 
COG ID[COG0377] NADH:ubiquinone oxidoreductase 20 kD subunit and related Fe-S oxidoreductases 
TIGRFAM ID[TIGR01957] NADH-quinone oxidoreductase, B subunit 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.739873 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTCTGG AAGAGAAACT CCCGAACGGA TTCCTGCTGA CCACGTTGGA GGGTGTGGTC 
AACTGGGCCC GTAAGAACTC GATGTGGCCC GCTACGTTCG GCCTGGCTTG CTGTGCCATC
GAGATGATGA CCACCGGTGG CTCCCGCTAC GACATCGCGC GGTTCGGCAT GGAGCGTTTC
GCGGCCACGC CGAGGCAGGC CGATCTCATG ATCGTCGCGG GGCGGGTCAC GCAGAAGATG
GCCCCGGTCC TGCGGCAGAT CTACGACCAG ATGCCCGAGC CGAAGTGGGT GCTCGCGATG
GGGGTGTGCG CCTCCTCGGG CGGGATGTTC AACAACTACG CCGTCGTGCA GGGGGTCGAC
CACATCGTCC CGGTGGACAT GTACCTGCCG GGTTGTCCAC CTCGGCCGGA GATGTTGCTC
GACGCGATCC TCAAGTTGCA CGCCAAGGTT CAGGACGAAC CCATGGGTCC GCGGCGTGCT
GCGCTGCGTG CGAAGAGCGG GAAGCAGACG GAGATCATCC CGTCGTCGAT CAAGTACGCG
AAGAAGTGA
 
Protein sequence
MGLEEKLPNG FLLTTLEGVV NWARKNSMWP ATFGLACCAI EMMTTGGSRY DIARFGMERF 
AATPRQADLM IVAGRVTQKM APVLRQIYDQ MPEPKWVLAM GVCASSGGMF NNYAVVQGVD
HIVPVDMYLP GCPPRPEMLL DAILKLHAKV QDEPMGPRRA ALRAKSGKQT EIIPSSIKYA
KK