Gene Svir_02210 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_02210 
Symbol 
ID8385559 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp222235 
End bp223353 
Gene Length1119 bp 
Protein Length372 aa 
Translation table11 
GC content69% 
IMG OID644974322 
Productsignal transduction histidine kinase 
Protein accessionYP_003132130 
Protein GI257054298 
COG category[T] Signal transduction mechanisms 
COG ID[COG4585] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACCA CACACGAACC CCACCCCGAA ACCGCGTCCA CCGACTCGTC GTGGTGGTCG 
GAGGTCGGTT GGGTCCACCT CGTCTACCTC GCCTTCCTGA TCCCGCAGCC GATCTACGAC
CCGGACTCGG GCCTGTGGGA CTGGGTGCTG GTGGTGGGTA TCGTCCTGGT GTTCCTCCCC
TTGTACGTGT TCGCCTGGGT GCGCCCCGAC CTGGCCCGAT GGGGGTCGGT CGTCCCCATG
ACGGCGCTCG GCGTCGTCAC CACGCCGCTG AACTCGGGTG CCGCGGTGTT GTTCGTCTAC
GCCGCCGCCA TAGCCGGTGT CCGGGAGTCG CGGCGGATAG CGCTGCGCTG GTTCATCGGG
TTGACGGTGG TGTTGTGCGT GCTGGTGTCG TTCTCCCCGG TACCGCTGCC GCAGCGGCTG
TGGGGGCTGG GGCCACCACT GGTGTTCATC TGGATCATCG GCCTCACCCA GATCGAACAG
GCGGAACGGG ATCGGGAGGC GGCGGAGCTG AGGCTGCGCA ACGCCCGGGT CGAGCATCTG
GCCACCGTCT CCGAGCGCGA ACGGATCGCC AGGGAGTTGC ACGACCTGCT CGGCCACTCG
CTCACCTCGA TGATCATGCA CGCACAGCTC TGTCAGAACC TCGTCGAGGT GGACCCGGCG
CGAGCCCGCG AAGCGGCGGC CAAGGCGGAA CGGACCGCCC GTGCCGCGTT GACCGAGGTG
CGCGCCGCGG TCAGCGGCCT GCGCCAGGCG AGTCTCGACG CCGAGCTGGA ATCGGCGCGG
GAGACGCTGT CGAGCGTGGG GGTGGAGCTG GTGACGCGGT GCGACAGGTC GCTGCGATTG
GTCGGGTCCA CCGAACACGG ACTGGCACTG GCGCTGCGGG AGGCGATCAC CAACGTCGCC
AGGCACGCCC GCGCGCGAAG CTGTTGTGTC AGCCTGTCGG TTGTGGACGA AGAGCTGCGA
TTGGTGATCG CCGACGACGG GACCGGCGGG CGGCACCGGG CTGGCAACGG TCTGGCCGGG
ATGCGGGAAC GGATCAGCGT GCTCGGCGGT CGGGTCGAGT GGTCCGGGTC GGCGGGCACG
ACGGTGACGA TCGCGGTACC TCTACGGGTG GCGACCTGA
 
Protein sequence
MTTTHEPHPE TASTDSSWWS EVGWVHLVYL AFLIPQPIYD PDSGLWDWVL VVGIVLVFLP 
LYVFAWVRPD LARWGSVVPM TALGVVTTPL NSGAAVLFVY AAAIAGVRES RRIALRWFIG
LTVVLCVLVS FSPVPLPQRL WGLGPPLVFI WIIGLTQIEQ AERDREAAEL RLRNARVEHL
ATVSERERIA RELHDLLGHS LTSMIMHAQL CQNLVEVDPA RAREAAAKAE RTARAALTEV
RAAVSGLRQA SLDAELESAR ETLSSVGVEL VTRCDRSLRL VGSTEHGLAL ALREAITNVA
RHARARSCCV SLSVVDEELR LVIADDGTGG RHRAGNGLAG MRERISVLGG RVEWSGSAGT
TVTIAVPLRV AT