Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_02210 |
Symbol | |
ID | 8385559 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | - |
Start bp | 222235 |
End bp | 223353 |
Gene Length | 1119 bp |
Protein Length | 372 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644974322 |
Product | signal transduction histidine kinase |
Protein accession | YP_003132130 |
Protein GI | 257054298 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4585] Signal transduction histidine kinase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 40 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCACCA CACACGAACC CCACCCCGAA ACCGCGTCCA CCGACTCGTC GTGGTGGTCG GAGGTCGGTT GGGTCCACCT CGTCTACCTC GCCTTCCTGA TCCCGCAGCC GATCTACGAC CCGGACTCGG GCCTGTGGGA CTGGGTGCTG GTGGTGGGTA TCGTCCTGGT GTTCCTCCCC TTGTACGTGT TCGCCTGGGT GCGCCCCGAC CTGGCCCGAT GGGGGTCGGT CGTCCCCATG ACGGCGCTCG GCGTCGTCAC CACGCCGCTG AACTCGGGTG CCGCGGTGTT GTTCGTCTAC GCCGCCGCCA TAGCCGGTGT CCGGGAGTCG CGGCGGATAG CGCTGCGCTG GTTCATCGGG TTGACGGTGG TGTTGTGCGT GCTGGTGTCG TTCTCCCCGG TACCGCTGCC GCAGCGGCTG TGGGGGCTGG GGCCACCACT GGTGTTCATC TGGATCATCG GCCTCACCCA GATCGAACAG GCGGAACGGG ATCGGGAGGC GGCGGAGCTG AGGCTGCGCA ACGCCCGGGT CGAGCATCTG GCCACCGTCT CCGAGCGCGA ACGGATCGCC AGGGAGTTGC ACGACCTGCT CGGCCACTCG CTCACCTCGA TGATCATGCA CGCACAGCTC TGTCAGAACC TCGTCGAGGT GGACCCGGCG CGAGCCCGCG AAGCGGCGGC CAAGGCGGAA CGGACCGCCC GTGCCGCGTT GACCGAGGTG CGCGCCGCGG TCAGCGGCCT GCGCCAGGCG AGTCTCGACG CCGAGCTGGA ATCGGCGCGG GAGACGCTGT CGAGCGTGGG GGTGGAGCTG GTGACGCGGT GCGACAGGTC GCTGCGATTG GTCGGGTCCA CCGAACACGG ACTGGCACTG GCGCTGCGGG AGGCGATCAC CAACGTCGCC AGGCACGCCC GCGCGCGAAG CTGTTGTGTC AGCCTGTCGG TTGTGGACGA AGAGCTGCGA TTGGTGATCG CCGACGACGG GACCGGCGGG CGGCACCGGG CTGGCAACGG TCTGGCCGGG ATGCGGGAAC GGATCAGCGT GCTCGGCGGT CGGGTCGAGT GGTCCGGGTC GGCGGGCACG ACGGTGACGA TCGCGGTACC TCTACGGGTG GCGACCTGA
|
Protein sequence | MTTTHEPHPE TASTDSSWWS EVGWVHLVYL AFLIPQPIYD PDSGLWDWVL VVGIVLVFLP LYVFAWVRPD LARWGSVVPM TALGVVTTPL NSGAAVLFVY AAAIAGVRES RRIALRWFIG LTVVLCVLVS FSPVPLPQRL WGLGPPLVFI WIIGLTQIEQ AERDREAAEL RLRNARVEHL ATVSERERIA RELHDLLGHS LTSMIMHAQL CQNLVEVDPA RAREAAAKAE RTARAALTEV RAAVSGLRQA SLDAELESAR ETLSSVGVEL VTRCDRSLRL VGSTEHGLAL ALREAITNVA RHARARSCCV SLSVVDEELR LVIADDGTGG RHRAGNGLAG MRERISVLGG RVEWSGSAGT TVTIAVPLRV AT
|
| |