Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_02200 |
Symbol | |
ID | 8385558 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | - |
Start bp | 221609 |
End bp | 222235 |
Gene Length | 627 bp |
Protein Length | 208 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 644974321 |
Product | two component transcriptional regulator, LuxR family |
Protein accession | YP_003132129 |
Protein GI | 257054297 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 40 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGTGGCG AGGTGGGAGG CGGCGGGATC AGGGTCGTGT TGGCCGAGGA CCAGACGATG GTCGTCGAGG CGTTCGCCGA GCTGCTCAAC CTCCAGCCGG ACATCACGGT GTGCGCCACC GCGAAGAACG GGGTGGACGC GTTGGCGGCG GTCGCGGAGC ACGACCCGGA CGTGCTGGTC GCCGACATCG AGATGCCCCG GGGAAGCGGT CTCGACGTGG CCGCGGAACT GCACCGCCGT GGCAGCCGCA CCAAGGTGCT CATCGTCACG ACCTTCGCCC GTAGCGGCTA TCTGCGGCGC GCCATGGACG CCGGGGTCAC CGGATACGTG CTCAAGGACG CGCCGATCGG CGAGCTGGCC GACGCGCTGC GCAAGGTGCA CGCCGGTGGA ACGGTCGTCT CCGCCGAGCT GGCGCTGGCC GCCTGGGACC ACTCCGACCA GCTCACCGAT CGGGAACGGG AGCTGCTACG CCAGGTGGCC GACGGAGCGA CCAATCGCGA CATCGCCCGA CGACTGCACC TGGCCGAGGG CACCGTCCGC AACTATCTGT CCGCCGCCAT GGCCAAACTG GGCGCCCGCA ACCGCACGGA GGCGGCCAAG GCGGCCCGGG AACGGGGCTG GATCTGA
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Protein sequence | MGGEVGGGGI RVVLAEDQTM VVEAFAELLN LQPDITVCAT AKNGVDALAA VAEHDPDVLV ADIEMPRGSG LDVAAELHRR GSRTKVLIVT TFARSGYLRR AMDAGVTGYV LKDAPIGELA DALRKVHAGG TVVSAELALA AWDHSDQLTD RERELLRQVA DGATNRDIAR RLHLAEGTVR NYLSAAMAKL GARNRTEAAK AARERGWI
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