Gene Svir_02200 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_02200 
Symbol 
ID8385558 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp221609 
End bp222235 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content71% 
IMG OID644974321 
Producttwo component transcriptional regulator, LuxR family 
Protein accessionYP_003132129 
Protein GI257054297 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTGGCG AGGTGGGAGG CGGCGGGATC AGGGTCGTGT TGGCCGAGGA CCAGACGATG 
GTCGTCGAGG CGTTCGCCGA GCTGCTCAAC CTCCAGCCGG ACATCACGGT GTGCGCCACC
GCGAAGAACG GGGTGGACGC GTTGGCGGCG GTCGCGGAGC ACGACCCGGA CGTGCTGGTC
GCCGACATCG AGATGCCCCG GGGAAGCGGT CTCGACGTGG CCGCGGAACT GCACCGCCGT
GGCAGCCGCA CCAAGGTGCT CATCGTCACG ACCTTCGCCC GTAGCGGCTA TCTGCGGCGC
GCCATGGACG CCGGGGTCAC CGGATACGTG CTCAAGGACG CGCCGATCGG CGAGCTGGCC
GACGCGCTGC GCAAGGTGCA CGCCGGTGGA ACGGTCGTCT CCGCCGAGCT GGCGCTGGCC
GCCTGGGACC ACTCCGACCA GCTCACCGAT CGGGAACGGG AGCTGCTACG CCAGGTGGCC
GACGGAGCGA CCAATCGCGA CATCGCCCGA CGACTGCACC TGGCCGAGGG CACCGTCCGC
AACTATCTGT CCGCCGCCAT GGCCAAACTG GGCGCCCGCA ACCGCACGGA GGCGGCCAAG
GCGGCCCGGG AACGGGGCTG GATCTGA
 
Protein sequence
MGGEVGGGGI RVVLAEDQTM VVEAFAELLN LQPDITVCAT AKNGVDALAA VAEHDPDVLV 
ADIEMPRGSG LDVAAELHRR GSRTKVLIVT TFARSGYLRR AMDAGVTGYV LKDAPIGELA
DALRKVHAGG TVVSAELALA AWDHSDQLTD RERELLRQVA DGATNRDIAR RLHLAEGTVR
NYLSAAMAKL GARNRTEAAK AARERGWI