| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_02110 |
|---|
| Symbol | |
|---|
| ID | 8385549 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharomonospora viridis DSM 43017 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013159 |
|---|
| Strand | - |
|---|
| Start bp | 213848 |
|---|
| End bp | 215386 |
|---|
| Gene Length | 1539 bp |
|---|
| Protein Length | 512 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 644974312 |
|---|
| Product | asparagine synthase, glutamine-hydrolyzing |
|---|
| Protein accession | YP_003132120 |
|---|
| Protein GI | 257054288 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0367] Asparagine synthase (glutamine-hydrolyzing) |
|---|
| TIGRFAM ID | [TIGR01536] asparagine synthase (glutamine-hydrolyzing) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.541499 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 0.683156 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGATCGCCA TTTCCGGCAT CGTCGCCGCA TACGGCCCCT TCGACCCGCT CGAAGGGATG
CGCATGCTCG ATCGACTGAC CCATCGAGGC CCCGACGGTC AGGGCACCCA GGCTCTGGAC
CACGCCTGGC TCGGCCATCG CAGGCTCGCC GTCGTGGACC TGGAAGGCGG GGCCCAGCCC
CTGCGGGACC CGAACGGCCG ATACTGGCTC GTCGGCGACG GGGAGATCTA CAACTACGAG
CGACTCCGCC ACGAACTGGA AGCGCGGGGT CACACGTTCC GCACCCGCAC GGACCAGGAG
AGTGCACTGC ACCTGCTGGA GGACGAGGGG ACGGAGGCGC TGTCCCGGTT GTGGGGGATG
TTCGCGTTCG CCGGTGCCAC CGTCGACGGA CGGTTCTTCG CCGCACGCGA CACCATGGGA
CTCGCCCCCC TGTACTGGGC GAGGCAGGAC GGCACCGTGG TGTTCAGCAG TGAGCTCAAG
GCGTTCGACC CGCACCGGCG GCCGGACGTC GAGCTCTTCC CACCGGGGCA CGTCTGGAGT
CCTCAGGACG GGTTGACGGA GTTCCGGCCA CTTCCCGAGG TGGAACCCAT CGCACCCACC
GTGGCGAACC ACGAGGACCC GGAGCCGCCC GAGGAGGTGT TCGCGACCAT CCGCGACCGG
CTCATCCATG CGGTGGAACG GTACACGGAA GCGGACGTCC CGGTGGGTGC CCTGCTGTCG
GGCGGTCTCG ACTCCAGCAT CGTCACCGCG ATCGCGGCCC GGCACGCGCA GAGGAAGGGA
CGCAAGTTCC GCACGTTCGC CGCCGGCCTC GTCGACAGCG ACGACGTGCT CGCCGCGCGC
GAGGTCGCCG AGGCGTTGGG CACCGAACAT TCGGAACGGC TCTACACGAA CGACGAACTC
ATCGACTGGA TGCCCGAAGT CATCAGGGTG ATCGAGTCGT TCGACCCCCA GTTGCTGCAC
AGTTCCGTAC CGAACCTGCT GGTGTCCAAA CGGGCGGCGC GGGACGTGAA GGTGGTGCTG
CTCGGGGAGG GCGCCGACGA ACTCTTCGCG GGCTACGGCT ACTACGGCGA GATCAGCGGC
GAGGCGGAAC TGCACGAGAC CTTGCTCTCG GCCATCCGGG ACCTGCACAT GGGAGGGCTG
CAACGCGTCG ACAGGGTGGC GGGCGCCACC GGTCTCGAAC CCAGGACGCC GTTCCTCGAC
CTCGACGTGG TGGAGTTGGG GCTGAGCCTG CCCGCGCGGT GGAAACTGTC CAGCGGGAGC
CGCCCGGAGA AGTGGTTGCT GCGCAAGGCG TTCGACGGCT GGTTGCCCGA GAGCGTGCTG
TGGCGGCCGA AGGCCCAGTT CGGTCAGGGG ACCGGCTCCC GGGACGTGCT GGGCGAGTAC
TACGCCTCGA CGGTGTCGAA GGAGGAGTTC GAGAACGAAC GCTACGTCCT GGACCCGCCG
TTGCACTCCC GGGAGGAACT CGCCTACTTC CGCATGTTCC AGCGGGAGTT GAAAGGTGTC
GACCCGCAGC GTCTGGTGGG GCGTTTCGAA GGTTGGTGA
|
|---|
| Protein sequence | MIAISGIVAA YGPFDPLEGM RMLDRLTHRG PDGQGTQALD HAWLGHRRLA VVDLEGGAQP
LRDPNGRYWL VGDGEIYNYE RLRHELEARG HTFRTRTDQE SALHLLEDEG TEALSRLWGM
FAFAGATVDG RFFAARDTMG LAPLYWARQD GTVVFSSELK AFDPHRRPDV ELFPPGHVWS
PQDGLTEFRP LPEVEPIAPT VANHEDPEPP EEVFATIRDR LIHAVERYTE ADVPVGALLS
GGLDSSIVTA IAARHAQRKG RKFRTFAAGL VDSDDVLAAR EVAEALGTEH SERLYTNDEL
IDWMPEVIRV IESFDPQLLH SSVPNLLVSK RAARDVKVVL LGEGADELFA GYGYYGEISG
EAELHETLLS AIRDLHMGGL QRVDRVAGAT GLEPRTPFLD LDVVELGLSL PARWKLSSGS
RPEKWLLRKA FDGWLPESVL WRPKAQFGQG TGSRDVLGEY YASTVSKEEF ENERYVLDPP
LHSREELAYF RMFQRELKGV DPQRLVGRFE GW
|
|---|
| |