Gene Svir_01690 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_01690 
Symbol 
ID8385507 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp178807 
End bp179547 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content66% 
IMG OID644974273 
Productpredicted Zn peptidase 
Protein accessionYP_003132083 
Protein GI257054251 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2856] Predicted Zn peptidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.224928 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCGCTGC GGCGAGGTTT CAAGGCGACC GCCAGACGAC TCGCAGCGGA CGTGCGTGAC 
GAATTGGGCA TCGCCGCCTT CGAACCACTC GACCCCTACG CCCTCGCACG CCTCTACGGC
GTCGAGGTGT TCACCCTCGA TGCGCCCTGG CTACCCCGGG ACGCCGTCGA ACACTTCACC
GGCACCGCCG CCGAGTCGTT CTCCGGAGCA CTGATCCAGA TCGGAACCGG ATGCGTGATC
GTCGAGAACC ACACGCACAC CGACACCCGT CGCCGTTCCA CCGTGGCACA CGAGATGGCC
CACGTACTGC TGGAACACGA ATTCGGGGTG CTGGTCACCG GTGGCACCCC GTGCCGCTCC
ACCACGACGG AGATCGAACA GGAGGCGGCG GAACTGTCCG GCGAACTGCT GCTGCCCCGT
GACGCCGCGA GGACGGCCGC CTTCCGCGGT TGGACCGACA CCACCATCGC ACGCTATTTC
CGGGTCAGCG AACGCATGGC GCGATGGCGG ATGAACGTCA CCGGAGCCCG GCGTATCGCG
CGGCGGACCC GGGACAGGCG GGCGCACGGC GCCGCCGAGC GGTCGGTGCC CGATGTCACC
GTCCGGAATC CGACCACCGA GGCGACCAGC GCCCGACACA CATCAAAATT TCCACAGTGG
ACTAGATTGG ATCATGCCCC AGGGCCACCG AATCGATTAT CCAAAGTAGC CAGATCATCC
GACGACTCGA TAGGACCGTG A
 
Protein sequence
MALRRGFKAT ARRLAADVRD ELGIAAFEPL DPYALARLYG VEVFTLDAPW LPRDAVEHFT 
GTAAESFSGA LIQIGTGCVI VENHTHTDTR RRSTVAHEMA HVLLEHEFGV LVTGGTPCRS
TTTEIEQEAA ELSGELLLPR DAARTAAFRG WTDTTIARYF RVSERMARWR MNVTGARRIA
RRTRDRRAHG AAERSVPDVT VRNPTTEATS ARHTSKFPQW TRLDHAPGPP NRLSKVARSS
DDSIGP