Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_01640 |
Symbol | |
ID | 8385502 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | + |
Start bp | 176018 |
End bp | 176473 |
Gene Length | 456 bp |
Protein Length | 151 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 644974268 |
Product | transcriptional regulator |
Protein accession | YP_003132079 |
Protein GI | 257054247 |
COG category | [K] Transcription |
COG ID | [COG1846] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 0.98097 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.211927 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCGCTGGC TGACCGACAC GGAGATGTCG GTATGGCGTT CCTACATCGT CTCGACGTTG ATGTTGCGGC AGCGACTGCA CAGGGAACTT TCCGAACGGC ATGCGCTGTC GCTGATCGAT TACGAGGTCA TGGTCTGTCT GTCGGAGGCC GAGAACAACG CCATGCGCAT GACCGAGCTG GCGAAGACGC TCGGGTCCAC CAAGAGTCGG CTGTCGCACC AGATCGCCCG CATGGAGGCG GAGGGCTACG TGCGGCGTAT CAAGCACGTG GGCGACCGCA GAGGGGTGAC CGCGGAGCTC ACGCAGAAGG GGGCCGAGCT GTTGCACGAG TCCGCGCCCA CGCACGTGAA GGGCGTGCGG GCCCACTTCG TGGATCTGCT GACCGAGCAG GAGAAACAGC TCATGGGACG CGCGTTCTCA CGGGTCGTCA CACACCTGTC GGGGCTGGGG GACTGA
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Protein sequence | MRWLTDTEMS VWRSYIVSTL MLRQRLHREL SERHALSLID YEVMVCLSEA ENNAMRMTEL AKTLGSTKSR LSHQIARMEA EGYVRRIKHV GDRRGVTAEL TQKGAELLHE SAPTHVKGVR AHFVDLLTEQ EKQLMGRAFS RVVTHLSGLG D
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