Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_01550 |
Symbol | |
ID | 8385493 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | + |
Start bp | 165979 |
End bp | 167028 |
Gene Length | 1050 bp |
Protein Length | 349 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 644974259 |
Product | N-acetylneuraminate synthase |
Protein accession | YP_003132070 |
Protein GI | 257054238 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2089] Sialic acid synthase |
TIGRFAM ID | [TIGR03586] pseudaminic acid synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.0492033 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGTGAGG TGCGTATCGG CAAGTACACC GTCGGCCCCG ACCACCCGCC GTTCGTGATC GCCGAGATGT CGGGCAACCA CAACGGTGAC CTCGACCGTG CGCTGGCGAT CGTGGACGCG GTCGCCGACA GCGGGGCGCA CGCGGTGAAA CTCCAGACCT ACCGTGCCGA CACCATCACC ATCGACGTCG ATCGGCCCGA GTTCCGTATC GACAACGAGG CCTCGCTGTG GCACGGGGAG AACCTCTACC GTCTGTACGA GCGGGCACAC ACCCCGTGGG AGTGGCACGA GCGGTTGTTC GCCCGGGCCC GCGAGCGGGG CCTGGAGGTG TTCTCCAGCC CGTTCGACCC CACCGCGGTG GACCTGCTCG AATCGCTGGA CGCCTGTGCG TACAAGATCG CCTCGTCGGA GATCGTGGAT CTGCCGCTGA TCGAGCTGTG CGCGCGCACG GGCAAACCGC TGGTGATCTC CACGGGGAAG GCGACGATCG CGGAGATCGA CGCCGCCGTC CGGACCGCGC GGGACGCGGG CAACGACCAG ATCCTGTTGC TGGGCTGCAC CGCTTCGTAC CCGGCACCGG CCGAGGACAG CAACCTGCGC GCACTGCCCG TGTTGGAGCA GGCCTTCGGG GTGCCCGTGG GACTGTCGGA CCACACCATG GGCATCGGGG TGCCCGTCGC GGCCGTCGCC CTGGGGGCGT GTGCGGTGGA GAAGCACGTC ACGCTCGCCC GCGACGACGG CGGGGTCGAC TCGGCGTTCT CGTTGGAGCC GCACGAACTG GCCGCGCTGG TCACCGAGAC GCGGCGGGCG TGGGAGGCGT TGGGCGTGCC GCGGATCGGT CCCAAGGCCA GCGAACGCGG TGGTCTGCGG CTGCGTCGTT CGCTCTACGT CGTGGAGGAC GTGCGGGCGG GGGACGTCGT GACCGAACAC AACGTGCGTT CGATCCGACC GGCGGGTGGA CTGCCGCCCG CGGAGATCAC CACGGTGCTG GGCCGCACCT TCCGGGTCGA CGCGGCCAAG GGCACGCCGC TGACCTGGGA CCTGCTGTAG
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Protein sequence | MSEVRIGKYT VGPDHPPFVI AEMSGNHNGD LDRALAIVDA VADSGAHAVK LQTYRADTIT IDVDRPEFRI DNEASLWHGE NLYRLYERAH TPWEWHERLF ARARERGLEV FSSPFDPTAV DLLESLDACA YKIASSEIVD LPLIELCART GKPLVISTGK ATIAEIDAAV RTARDAGNDQ ILLLGCTASY PAPAEDSNLR ALPVLEQAFG VPVGLSDHTM GIGVPVAAVA LGACAVEKHV TLARDDGGVD SAFSLEPHEL AALVTETRRA WEALGVPRIG PKASERGGLR LRRSLYVVED VRAGDVVTEH NVRSIRPAGG LPPAEITTVL GRTFRVDAAK GTPLTWDLL
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