| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_01290 |
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| Symbol | |
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| ID | 8385467 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | - |
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| Start bp | 137038 |
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| End bp | 137874 |
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| Gene Length | 837 bp |
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| Protein Length | 278 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644974233 |
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| Product | HAD-superfamily hydrolase, subfamily IIB |
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| Protein accession | YP_003132044 |
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| Protein GI | 257054212 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0561] Predicted hydrolases of the HAD superfamily |
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| TIGRFAM ID | [TIGR00099] Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily
[TIGR01484] HAD-superfamily hydrolase, subfamily IIB |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.384246 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCTGGA AAACTGGGCT CGTGGAGAAG CCCAACCTGA TCGCCTCTGA CATCGACGGT
ACCCTGCTCA CCCCACTCGG GGAGGTGGCC CCGCGCACCG TCGACGTGGT GCGTCGTGCC
AGCGACGAGG GAGTCCCGGT CATACTCGTG ACCGGCAGGC CACCCCGTTG GATTCCCCCT
GTCGCGGAAG CCACCGGCCT GACCGGCTAC GCGGTGTGCG CGAACGGCGC CGTGCTCTAC
GACATCGGCG CCGACCGGGT GGTCGACGTC CAGAGCCAGC TCGATCCCAT GCAGCTCCAC
GACGTGGCCC AAGCCCTCGA CCACGCCATC CCGGGTTGTC AACTGGCCGC GGAACGCATC
GGCACGAGGG CGGTGGAACC CGGCCTGCAG AACTTCGTGA TCGAATCCGA GTACTACAAC
CCATGGGGTG ACGGCGAGGG TTCGGTGGTC CCCCGGGCGG AAGTGCTCGG ACATCCTGCC
GTGAAACTGC TGGCCAGCCA CCGGAAGATG ACCTCGGACG AGATGGCGGC CGCGGCGTAC
GACGTGCTCG GTGACAGCGT GGACATCACG TTCTCCTCCG GCAGCGGCCT GATCGAGATC
GGCGCTCCCG GCGTCACGAA GGCCTCGGGG CTCGCCGAGA TCGCCGAGCT GTTCGGCGTC
GCGGACACGG ACGTCATCGC GTTCGGTGAC ATGCCCAACG ACCTTCCGAT GCTCGAATGG
GCGGGGCACG GGGTCGCCGT CGCCAACGCC CATCCGACCG TGTTGGAGGC CGCCGACGAG
GTCACCGCGT CCAACGCCGA GCACGGCGTG GCACAGGTGC TCGAACGCTG GTTCTAA
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| Protein sequence | MIWKTGLVEK PNLIASDIDG TLLTPLGEVA PRTVDVVRRA SDEGVPVILV TGRPPRWIPP
VAEATGLTGY AVCANGAVLY DIGADRVVDV QSQLDPMQLH DVAQALDHAI PGCQLAAERI
GTRAVEPGLQ NFVIESEYYN PWGDGEGSVV PRAEVLGHPA VKLLASHRKM TSDEMAAAAY
DVLGDSVDIT FSSGSGLIEI GAPGVTKASG LAEIAELFGV ADTDVIAFGD MPNDLPMLEW
AGHGVAVANA HPTVLEAADE VTASNAEHGV AQVLERWF
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