Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_01190 |
Symbol | |
ID | 8385457 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | + |
Start bp | 126467 |
End bp | 127372 |
Gene Length | 906 bp |
Protein Length | 301 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 644974223 |
Product | prephenate dehydratase |
Protein accession | YP_003132034 |
Protein GI | 257054202 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0077] Prephenate dehydratase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.70392 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCACGTA TCGCCTACTT CGGTCCCGTC GGAACGTTCT CGGAACAGGC CGCGCGTATG TTCGCCCAGG GGGAGAACCT GGTTCCTGTC GAGACGATCC CGGCGGCCCT GAGCGCCGTG CGCGAAGGGG AGGCCGAGTC GGCGTGCGTG CCGGTGGAGA ACTCGGTGGA GGGTCCGGTG ACGGCCACGC TCGACGGGTT GGCCGAGGGC TCGCCGCTGG TGGCCGTCGC CGAGGTGCTG TTGCCGGTGC ACTTCACGGT GCTGGTGCGA CCCGACGTGG ACACCATCCG CACCGTCGCC AGCCATCCGC ACGCACTGGC GCAGGTGCGC CACTGGCTGG AACGCAACCT GCCGGACGCG GAGACCGTGG TGGCGTCCTC CACGGCGGCC GCCGCGGTGG GGGTGTGTGA CGGGGAGTAC GACGCGGCGG TCACCGCGCC CGCGGCCGCG GAAACCTATC CGCTGAAGGT ATTCGCCGAG GGTGTCGCCG ACGTGCCCGA CGCGCGGACC CGGTTCCTGT TGCTGTCGCC GCCCGGGTCG TTGCCGGAGC CGACGGGCGC CGACCGCACC TCCATCGTGG CGGCGGCGGC GAACCGCACG GGTTCGCTCG CCGAGCTGCT CACCGAACTC GCGCTGCGTG ACATCAACCT GACCCGCCTC GACGCCCGCC CGGTCAAGGG CAACTTCGGG GTCTACCGGT TCTTCCTCGA CTTCGAGGGG CACATCGCCG AGGAGCGGGT CGGTGACGCG CTCGCCGCCT TGCGGAGACG CTGCGAGGTG CGGTTCCTCG GTTCGTACCC CCGCGCCGAC GGCGCGCGTC CCGTCGAGCG GGACACGGCC GCCGAGGAGC GGTTCGTCTC AGCTGCGCGG TGGGTCCAGG CGGTCAGGAA CGGTGAGCTG GCGTGA
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Protein sequence | MSRIAYFGPV GTFSEQAARM FAQGENLVPV ETIPAALSAV REGEAESACV PVENSVEGPV TATLDGLAEG SPLVAVAEVL LPVHFTVLVR PDVDTIRTVA SHPHALAQVR HWLERNLPDA ETVVASSTAA AAVGVCDGEY DAAVTAPAAA ETYPLKVFAE GVADVPDART RFLLLSPPGS LPEPTGADRT SIVAAAANRT GSLAELLTEL ALRDINLTRL DARPVKGNFG VYRFFLDFEG HIAEERVGDA LAALRRRCEV RFLGSYPRAD GARPVERDTA AEERFVSAAR WVQAVRNGEL A
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